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| author | zsloan | 2022-10-31 15:45:43 +0000 |
|---|---|---|
| committer | zsloan | 2022-10-31 15:45:43 +0000 |
| commit | c08b50c0bc9ce2d39403d64920af807896e0b175 (patch) | |
| tree | cd44ab4113d2e31480a747573fa8a96f4c6351cd /wqflask | |
| parent | 22a4da0b48006b7ca243c7f11e17a28f61142e5a (diff) | |
| download | genenetwork2-c08b50c0bc9ce2d39403d64920af807896e0b175.tar.gz | |
Update Rat links to rn7
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/show_trait/show_trait.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/wqflask/show_trait/show_trait.py b/wqflask/wqflask/show_trait/show_trait.py index 3cdd4831..a1e8f964 100644 --- a/wqflask/wqflask/show_trait/show_trait.py +++ b/wqflask/wqflask/show_trait/show_trait.py @@ -127,7 +127,7 @@ class ShowTrait: if self.dataset.group.species == "rat": self.UCSC_BLAT_URL = webqtlConfig.UCSC_BLAT % ( - 'rat', 'rn6', blatsequence) + 'rat', 'rn7', blatsequence) self.UTHSC_BLAT_URL = "" elif self.dataset.group.species == "mouse": self.UCSC_BLAT_URL = webqtlConfig.UCSC_BLAT % ( @@ -429,7 +429,7 @@ class ShowTrait: transcript_start = int(transcript_start * 1000000) transcript_end = int(transcript_end * 1000000) self.ucsc_blat_link = webqtlConfig.UCSC_REFSEQ % ( - 'rn6', kgId, chr, transcript_start, transcript_end) + 'rn7', kgId, chr, transcript_start, transcript_end) if self.this_trait.geneid and (self.dataset.group.species == "mouse" or self.dataset.group.species == "rat" or self.dataset.group.species == "human"): self.biogps_link = webqtlConfig.BIOGPS_URL % ( |