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authorzsloan2019-10-15 10:52:38 -0500
committerzsloan2019-10-15 10:52:38 -0500
commit1df4248f88a1bbbc82446cd5e51daf07597b57bc (patch)
treefdcd2a109c78b4b5c20c11d8ea0232ed2eca1324 /wqflask
parent976d9f6d26c10fe4d6fed511506c7b419d0cb637 (diff)
downloadgenenetwork2-1df4248f88a1bbbc82446cd5e51daf07597b57bc.tar.gz
Added a description with the marker name for genotype traits in collections page
Fixed X/Y axis labels on correlation scatterplot page to correctly show genotype traits
Diffstat (limited to 'wqflask')
-rw-r--r--wqflask/wqflask/templates/collections/view.html6
-rw-r--r--wqflask/wqflask/templates/corr_scatterplot.html22
2 files changed, 27 insertions, 1 deletions
diff --git a/wqflask/wqflask/templates/collections/view.html b/wqflask/wqflask/templates/collections/view.html
index a23f3f70..26dcef65 100644
--- a/wqflask/wqflask/templates/collections/view.html
+++ b/wqflask/wqflask/templates/collections/view.html
@@ -134,7 +134,13 @@
{% else %}
<TD data-export="N/A">N/A</TD>
{% endif %}
+ {% if this_trait.dataset.type == "Geno" %}
+ <TD title="Marker: {{ this_trait.name }}" data-export="Marker: {{ this_trait.name }}">Marker: {{ this_trait.name }}</TD>
+ {% elif this_trait.description_display != "" %}
<TD title="{{ this_trait.description_display }}" data-export="{{ this_trait.description_display }}">{{ this_trait.description_display }}</TD>
+ {% else %}
+ <TD title="N/A" data-export="N/A">N/A</TD>
+ {% endif %}
<TD data-export="{{ this_trait.location_repr }}">{{ this_trait.location_repr }}</TD>
<TD data-export="{{ this_trait.mean }}" align="right">{{ '%0.3f' % this_trait.mean|float }}</TD>
<TD data-export="{{ this_trait.LRS_score_repr }}" align="right">{{ '%0.3f' % this_trait.LRS_score_repr|float }}</TD>
diff --git a/wqflask/wqflask/templates/corr_scatterplot.html b/wqflask/wqflask/templates/corr_scatterplot.html
index f60a7129..545c0b94 100644
--- a/wqflask/wqflask/templates/corr_scatterplot.html
+++ b/wqflask/wqflask/templates/corr_scatterplot.html
@@ -25,7 +25,7 @@
<table>
<tr>
- <td style="vertical-align: middle;">Width <input class="chartupdatewh" id="width" type="text" value="800" style="width: 44px; height: 22px;"> px</td>
+ <td style="vertical-align: middle;">Width <input class="chartupdatewh" id="width" type="text" value="800" style="width: 44px; height: 22px;"> px </td>
<td style="vertical-align: middle;">Height <input class="chartupdatewh" id="height" type="text" value="700" style="width: 44px; height: 22px;"> px</td>
</tr>
</table>
@@ -192,6 +192,16 @@
<a href="{{trait_1.pubmed_link}}">PubMed: {{trait_1.pubmed_text}}</a>
{{trait_1.description_display}}
</div>
+ {% elif trait_1.dataset.type == "Geno" %}
+ <div>
+ X axis:
+ <a href="{{url_for('show_trait_page', trait_id = trait_1.name, dataset = trait_1.dataset.name)}}">
+ {{trait_1.dataset.group.species + " " + trait_1.dataset.group.name + " " + trait_1.dataset.name + ": " + trait_1.name|string}}
+ </a>
+ </div>
+ <div>
+ Location: {{trait_1.location_repr}} Mb
+ </div>
{% endif %}
<br/>
@@ -218,6 +228,16 @@
<a href="{{trait_2.pubmed_link}}">PubMed: {{trait_2.pubmed_text}}</a>
{{trait_2.description_display}}
</div>
+ {% elif trait_2.dataset.type == "Geno" %}
+ <div>
+ Y axis:
+ <a href="{{url_for('show_trait_page', trait_id = trait_2.name, dataset = trait_2.dataset.name)}}">
+ {{trait_2.dataset.group.species + " " + trait_2.dataset.group.name + " " + trait_2.dataset.name + ": " + trait_2.name|string}}
+ </a>
+ </div>
+ <div>
+ Location: {{trait_2.location_repr}} Mb
+ </div>
{% endif %}
</div>
</div>