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| author | zsloan | 2021-08-23 17:11:28 +0000 |
|---|---|---|
| committer | zsloan | 2021-08-23 17:11:28 +0000 |
| commit | 4dafd017ec1fc0cd1e78487560ed15d705a44b98 (patch) | |
| tree | 6b6578f7855f6585dafc4562108c5a187b2ab581 /wqflask | |
| parent | 898b80d34442c16399366a5744cc26a157a727cb (diff) | |
| download | genenetwork2-4dafd017ec1fc0cd1e78487560ed15d705a44b98.tar.gz | |
For some reason sample_data was being set twice, and the second time used a test function that does not exclude parents/f1s (causing the N to be wrong if parents/f1s exist)
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/correlation/correlation_gn3_api.py | 2 |
1 files changed, 0 insertions, 2 deletions
diff --git a/wqflask/wqflask/correlation/correlation_gn3_api.py b/wqflask/wqflask/correlation/correlation_gn3_api.py index f7c06a46..a78cb0b9 100644 --- a/wqflask/wqflask/correlation/correlation_gn3_api.py +++ b/wqflask/wqflask/correlation/correlation_gn3_api.py @@ -150,8 +150,6 @@ def fetch_sample_data(start_vars, this_trait, this_dataset, target_dataset): sample_data = process_samples( start_vars, this_dataset.group.samplelist) - sample_data = test_process_data(this_trait, this_dataset, start_vars) - if target_dataset.type == "ProbeSet": target_dataset.get_probeset_data(list(sample_data.keys())) else: |