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authorzsloan2021-03-30 18:29:56 +0000
committerzsloan2021-03-30 18:29:56 +0000
commitef51e08753defdfc7f3e67f8788cd1362d2cf631 (patch)
tree0e93559d8916dfb3933f1ef0e134567c918b1378 /wqflask
parent6a5576bb1271060c703871aedf16360847c68f8b (diff)
downloadgenenetwork2-ef51e08753defdfc7f3e67f8788cd1362d2cf631.tar.gz
Shifted some code out of the try/except that shouldn't have been inside it
Diffstat (limited to 'wqflask')
-rw-r--r--wqflask/wqflask/correlation_matrix/show_corr_matrix.py8
1 files changed, 4 insertions, 4 deletions
diff --git a/wqflask/wqflask/correlation_matrix/show_corr_matrix.py b/wqflask/wqflask/correlation_matrix/show_corr_matrix.py
index a67ea9f4..f77761d8 100644
--- a/wqflask/wqflask/correlation_matrix/show_corr_matrix.py
+++ b/wqflask/wqflask/correlation_matrix/show_corr_matrix.py
@@ -150,14 +150,14 @@ class CorrelationMatrix(object):
this_trait_vals.append(sample_value)
self.trait_data_array.append(this_trait_vals)
+ groups = []
+ for sample in self.all_sample_list:
+ groups.append(1)
+
try:
corr_result_eigen = np.linalg.eig(np.array(self.pca_corr_results))
corr_eigen_value, corr_eigen_vectors = sortEigenVectors(corr_result_eigen)
- groups = []
- for sample in self.all_sample_list:
- groups.append(1)
-
if self.do_PCA == True:
self.pca_works = "True"
self.pca_trait_ids = []