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authorzsloan2018-04-09 16:32:25 +0000
committerzsloan2018-04-09 16:32:25 +0000
commitab914075b0a83428e471ce7ffbe5700c5c0a9625 (patch)
tree08ffbc304ead5add9a32692f78e5687a5626d5f1 /wqflask/wqflask
parent275cf9b5512df676d23f6f26ba85b5cb2d772b68 (diff)
downloadgenenetwork2-ab914075b0a83428e471ce7ffbe5700c5c0a9625.tar.gz
Removed some unused code in webqtlConfig; some might need to be added back in later when other third party links are implemented on the trait/collection pages
Diffstat (limited to 'wqflask/wqflask')
-rw-r--r--wqflask/wqflask/marker_regression/marker_regression_gn1.py40
1 files changed, 0 insertions, 40 deletions
diff --git a/wqflask/wqflask/marker_regression/marker_regression_gn1.py b/wqflask/wqflask/marker_regression/marker_regression_gn1.py
index a55b6c10..c196b58b 100644
--- a/wqflask/wqflask/marker_regression/marker_regression_gn1.py
+++ b/wqflask/wqflask/marker_regression/marker_regression_gn1.py
@@ -406,51 +406,11 @@ class MarkerRegression(object):
else:
self.GraphInterval = self.cMGraphInterval #cM
- ################################################################
- # Get Trait Values and Infomation
- ################################################################
- ##input from search page or selection page
- #self.searchResult = fd.formdata.getvalue('searchResult')
- ##convert single selection into a list
- #if type("1") == type(self.searchResult):
- # self.searchResult = string.split(self.searchResult,'\t')
- #
- #self.traitList = []
- #if self.searchResult and len(self.searchResult) > webqtlConfig.MULTIPLEMAPPINGLIMIT:
- # heading = 'Multiple Interval Mapping'
- # detail = ['In order to get clear result, do not select more than %d traits for \
- # Multiple Interval Mapping analysis.' % webqtlConfig.MULTIPLEMAPPINGLIMIT]
- # self.error(heading=heading,detail=detail)
- # return
- #elif self.searchResult:
- # self.dataSource = 'selectionPage'
- # for item in self.searchResult:
- # thisTrait = webqtlTrait(fullname=item, cursor=self.cursor)
- # thisTrait.retrieveInfo()
- # thisTrait.retrieveData(fd.strainlist)
- # self.traitList.append(thisTrait)
- #else:
-
- #input from data editing page
- #fd.readData()
- #if not fd.allTraitData:
- # heading = "Mapping"
- # detail = ['No trait data was selected for %s data set. No mapping attempted.' % fd.RISet]
- # self.error(heading=heading,detail=detail)
- # return
-
self.dataSource = 'editingPage'
self.traitList = []
thisTrait = start_vars['this_trait']
- #fullname = fd.formdata.getvalue('fullname', '')
- #if fullname:
- # thisTrait = webqtlTrait(fullname=fullname, data=fd.allTraitData, cursor=self.cursor)
- # thisTrait.retrieveInfo()
- #else:
- # thisTrait = webqtlTrait(data=fd.allTraitData)
self.traitList.append(thisTrait)
-
## BEGIN HaplotypeAnalyst
## count the amount of individuals to be plotted, and increase self.graphHeight
if self.haplotypeAnalystChecked and self.selectedChr > -1: