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authorLei Yan2014-08-21 18:56:29 +0000
committerLei Yan2014-08-21 18:56:29 +0000
commit7ff0dcda04dc853620bb5162180f18db596f1574 (patch)
tree0d4c0160607badcc800e6ee27cc32d5a4bbbd04c /wqflask/wqflask
parent41fb705cc57c94276573fd19b50c91c095fe76a9 (diff)
downloadgenenetwork2-7ff0dcda04dc853620bb5162180f18db596f1574.tar.gz
Committer: Lei Yan <lei@penguin.uthsc.edu>
On branch master
Diffstat (limited to 'wqflask/wqflask')
-rwxr-xr-xwqflask/wqflask/correlation/show_corr_results.py6
-rwxr-xr-xwqflask/wqflask/templates/correlation_page.html8
2 files changed, 5 insertions, 9 deletions
diff --git a/wqflask/wqflask/correlation/show_corr_results.py b/wqflask/wqflask/correlation/show_corr_results.py
index 06cf1915..f35fe075 100755
--- a/wqflask/wqflask/correlation/show_corr_results.py
+++ b/wqflask/wqflask/correlation/show_corr_results.py
@@ -164,7 +164,7 @@ class CorrelationResults(object):
 
             for _trait_counter, trait in enumerate(self.correlation_data.keys()[:self.return_number]):
                 print("trait name:", trait)
-                trait_object = GeneralTrait(dataset=self.dataset, name=trait, get_qtl_info=True)
+                trait_object = GeneralTrait(dataset=self.target_dataset, name=trait, get_qtl_info=True)
                 
                 (trait_object.sample_r,
                 trait_object.sample_p,
@@ -474,10 +474,6 @@ class CorrelationResults(object):
                 this_trait_vals.append(sample_value)
                 target_vals.append(target_sample_value)
 
-        # print("trait:", trait)
-        print("this_trait_vals: %s" % this_trait_vals)
-        print("target_vals: %s" % target_vals)
-
         this_trait_vals, target_vals, num_overlap = corr_result_helpers.normalize_values(
             this_trait_vals, target_vals)
 
diff --git a/wqflask/wqflask/templates/correlation_page.html b/wqflask/wqflask/templates/correlation_page.html
index 88f6d65a..fc5aca42 100755
--- a/wqflask/wqflask/templates/correlation_page.html
+++ b/wqflask/wqflask/templates/correlation_page.html
@@ -24,7 +24,7 @@
             <table id="corr_results" class="table table-hover table-striped table-bordered">
                 <thead>
                     <tr>
-                    {% if dataset.type == 'ProbeSet' %}
+                    {% if target_dataset.type == 'ProbeSet' %}
                         <th>Trait</th>
                         <th>Symbol</th>
                         <th>Description</th>
@@ -47,7 +47,7 @@
                         <th>Tissue rho</th>
                         <th>Tissue p(rho)</th>
                         {% endif %}
-                    {% elif dataset.type == "Publish" %}
+                    {% elif target_dataset.type == "Publish" %}
                         <th>Record ID</th>
                         <th>Phenotype</th>
                         <th>Authors</th>
@@ -67,7 +67,7 @@
                 <tbody>
                 {% for trait in correlation_results %}
                     <tr>
-                    {% if dataset.type == 'ProbeSet' %}
+                    {% if target_dataset.type == 'ProbeSet' %}
                         <td><a href="/show_trait?trait_id={{trait.name}}&amp;dataset={{trait.dataset.name}}">{{ trait.name }}</a></td>
                         <td>{{ trait.symbol }}</td>
                         <td>{{ trait.description }} <br><br> <b>Aliases</b>: {{ trait.alias }}</td>
@@ -81,7 +81,7 @@
                         <td>{{'%0.3f'|format(trait.lit_corr)}}</td>
                         <td>{{'%0.3f'|format(trait.tissue_corr)}}</td>
                         <td>{{'%0.3e'|format(trait.tissue_pvalue)}}</td>
-                    {% elif dataset.type == "Publish" %}
+                    {% elif target_dataset.type == "Publish" %}
                         <td><a href="/show_trait?trait_id={{trait.name}}&amp;dataset={{trait.dataset.name}}">{{ trait.name }}</a></td>
                         <td>{{ trait.post_publication_description }}</td>
                         <td>{{ trait.authors }}</td>