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authorzsloan2017-05-22 15:48:34 +0000
committerzsloan2017-05-22 15:48:34 +0000
commitd3d8da25bd837068498c78d5f8541952ae950e56 (patch)
tree42b585c2e4020a621ff4c7a64797174ae5683565 /wqflask/utility
parente6afa39ac0bf769bed181ad9e16fc4fc8e16bb22 (diff)
parent9d4cb56608ca5de3495ede9149443e772a25d706 (diff)
downloadgenenetwork2-d3d8da25bd837068498c78d5f8541952ae950e56.tar.gz
Merge branch 'master' of https://github.com/genenetwork/genenetwork2
Diffstat (limited to 'wqflask/utility')
-rw-r--r--wqflask/utility/tools.py11
1 files changed, 6 insertions, 5 deletions
diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py
index c28c617a..d46a84ba 100644
--- a/wqflask/utility/tools.py
+++ b/wqflask/utility/tools.py
@@ -205,21 +205,24 @@ SQL_URI            = get_setting('SQL_URI')
 LOG_LEVEL          = get_setting('LOG_LEVEL')
 LOG_LEVEL_DEBUG    = get_setting_int('LOG_LEVEL_DEBUG')
 LOG_SQL            = get_setting_bool('LOG_SQL')
-LOG_SQLALCHEMY     = get_setting_bool('LOG_SQLALCHEMY')
+LOG_SQL_ALCHEMY    = get_setting_bool('LOG_SQL_ALCHEMY')
 LOG_BENCH          = get_setting_bool('LOG_BENCH')
 LOG_FORMAT         = "%(message)s"    # not yet in use
 USE_REDIS          = get_setting_bool('USE_REDIS')
 USE_GN_SERVER      = get_setting_bool('USE_GN_SERVER')
 
 GENENETWORK_FILES  = get_setting('GENENETWORK_FILES')
-TEMP_TRAITS        = get_setting('TEMP_TRAITS')
+GUIX_JS_PATH       = get_setting('GUIX_JS_PATH')
+assert_dir(GUIX_JS_PATH)
 
 PYLMM_COMMAND      = pylmm_command()
 GEMMA_COMMAND      = gemma_command()
-GEMMA_RESULTS_PATH = get_setting('GEMMA_RESULTS_PATH')
 PLINK_COMMAND      = plink_command()
 TEMPDIR            = tempdir() # defaults to UNIX TMPDIR
 
+TWITTER_POST_FETCHER_JS_PATH = GUIX_JS_PATH + "/Twitter-Post-Fetcher"
+assert_dir(TWITTER_POST_FETCHER_JS_PATH)
+
 from six import string_types
 
 if os.environ.get('WQFLASK_OVERRIDES'):
@@ -234,5 +237,3 @@ if os.environ.get('WQFLASK_OVERRIDES'):
             else:
                 OVERRIDES[k] = cmd
             logger.debug(OVERRIDES)
-
-assert_dir(get_setting("TWITTER_POST_FETCHER_JS_PATH"))