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authorzsloan2015-11-09 17:38:50 +0000
committerzsloan2015-11-09 17:38:50 +0000
commit74ba4029f0160f0c4708a8c4b291c05184d3993d (patch)
treee7af5cb1a4849d948d4343cb9e33f75f7869a6ee /wqflask/utility/tools.py
parentf93874f512ee07072bab46bfacc9282df4e12172 (diff)
downloadgenenetwork2-74ba4029f0160f0c4708a8c4b291c05184d3993d.tar.gz
Fixed issue that caused mapping to not work; for some reason the path to pylmm was wrong
Diffstat (limited to 'wqflask/utility/tools.py')
-rw-r--r--wqflask/utility/tools.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py
index 760ded7c..b8a41f60 100644
--- a/wqflask/utility/tools.py
+++ b/wqflask/utility/tools.py
@@ -63,7 +63,7 @@ def plink_command(default=None):
else:
None
- guess = os.environ.get('HOME')+'/plink'
+ guess = os.environ.get('HOME')+'/plink_gemma'
path = get_setting('PLINK_PATH',default,guess,get_valid_path)
plink_command = path+'/plink'
return path,plink_command