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authorzsloan2019-02-14 10:32:30 -0600
committerGitHub2019-02-14 10:32:30 -0600
commit21a4aa43ea62dd2b177661d87e2fee7a42c30798 (patch)
treeb2236491a4092e37ac8f861b72c70906229ed11e /wqflask/utility/tools.py
parent27a08a81107705f213d13fb7334a2b8eb4fd68d2 (diff)
parent61c13a09dba95958f183dc55f3d59c8856b5f753 (diff)
downloadgenenetwork2-21a4aa43ea62dd2b177661d87e2fee7a42c30798.tar.gz
Merge pull request #351 from pjotrp/gn-testing
Gn testing: updates to scripts, removed coffee scripts and removed pylmm code
Diffstat (limited to 'wqflask/utility/tools.py')
-rw-r--r--wqflask/utility/tools.py4
1 files changed, 0 insertions, 4 deletions
diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py
index ea216a35..86ef2e1e 100644
--- a/wqflask/utility/tools.py
+++ b/wqflask/utility/tools.py
@@ -107,9 +107,6 @@ def js_path(module=None):
return try_guix
raise "No JS path found for "+module+" (if not in Guix check JS_GN_PATH)"
-def pylmm_command(guess=None):
- return assert_bin(get_setting("PYLMM_COMMAND",guess))
-
def gemma_command(guess=None):
return assert_bin(get_setting("GEMMA_COMMAND",guess))
@@ -276,7 +273,6 @@ SMTP_CONNECT = get_setting('SMTP_CONNECT')
SMTP_USERNAME = get_setting('SMTP_USERNAME')
SMTP_PASSWORD = get_setting('SMTP_PASSWORD')
-PYLMM_COMMAND = app_set("PYLMM_COMMAND",pylmm_command())
GEMMA_COMMAND = app_set("GEMMA_COMMAND",gemma_command())
assert(GEMMA_COMMAND is not None)
PLINK_COMMAND = app_set("PLINK_COMMAND",plink_command())