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author | zsloan | 2018-10-01 16:09:47 +0000 |
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committer | zsloan | 2018-10-01 16:09:47 +0000 |
commit | a3365dae23f204e489939d3defc55edc1b4872d8 (patch) | |
tree | d4b06818cd0af291cfa34a484e25a6c07621f1ea /wqflask/utility/helper_functions.py | |
parent | ee8e1eacd88399609f530a33e2d91cf7895da5b0 (diff) | |
download | genenetwork2-a3365dae23f204e489939d3defc55edc1b4872d8.tar.gz |
- Can now remove cofactors from correlation scatterplot and select them by just clicking their row in collection
- Cofactor color picker now works in Safari/Macs
- Displays N for relevant samples in trait page sample table
- Don't show bar chart when N>256
- Mapping loading page contents better centered
- Anonymous collections timeout correctly listed as 30 days now
- Minor allele frequency can actually be changed for GEMMA now (previously didn't work)
- Fixed transcript position marker location for mapping results
- Notifies user if their e-mail isn't associated with an account when they attempt to request forgotten password
- Users can now map with submitted traits
- Histogram width changes depending upon number of bins (need to improve this still)
- Improved Q-q plot (previously called "probability plot")
Diffstat (limited to 'wqflask/utility/helper_functions.py')
-rw-r--r-- | wqflask/utility/helper_functions.py | 8 |
1 files changed, 7 insertions, 1 deletions
diff --git a/wqflask/utility/helper_functions.py b/wqflask/utility/helper_functions.py index cf16879f..1c8dad10 100644 --- a/wqflask/utility/helper_functions.py +++ b/wqflask/utility/helper_functions.py @@ -14,7 +14,13 @@ logger = logging.getLogger(__name__ ) def get_species_dataset_trait(self, start_vars): #assert type(read_genotype) == type(bool()), "Expecting boolean value for read_genotype" - self.dataset = data_set.create_dataset(start_vars['dataset']) + if "temp_trait" in start_vars.keys(): + if start_vars['temp_trait'] == "True": + self.dataset = data_set.create_dataset(dataset_name = "Temp", dataset_type = "Temp", group_name = start_vars['group']) + else: + self.dataset = data_set.create_dataset(start_vars['dataset']) + else: + self.dataset = data_set.create_dataset(start_vars['dataset']) logger.debug("After creating dataset") self.species = TheSpecies(dataset=self.dataset) logger.debug("After creating species") |