autopep8: Fix E301,E302,E303,E304,E305,E306

9 files changed, 12 insertions, 3 deletions

diff --git a/wqflask/tests/unit/base/test_webqtl_case_data.py b/wqflask/tests/unit/base/test_webqtl_case_data.py
index 8e8ba482..cebd41ce 100644
--- a/wqflask/tests/unit/base/test_webqtl_case_data.py
+++ b/wqflask/tests/unit/base/test_webqtl_case_data.py
@@ -4,6 +4,7 @@ import unittest
 from wqflask import app  # Required because of utility.tools in webqtlCaseData.py
 from base.webqtlCaseData import webqtlCaseData
 
+
 class TestWebqtlCaseData(unittest.TestCase):
     """Tests for WebqtlCaseData class"""
 
diff --git a/wqflask/tests/unit/utility/test_authentication_tools.py b/wqflask/tests/unit/utility/test_authentication_tools.py
index 42dcae88..024ab43f 100644
--- a/wqflask/tests/unit/utility/test_authentication_tools.py
+++ b/wqflask/tests/unit/utility/test_authentication_tools.py
@@ -5,6 +5,7 @@ from unittest import mock
 from utility.authentication_tools import check_resource_availability
 from utility.authentication_tools import add_new_resource
 
+
 class TestResponse:
     """Mock Test Response after a request"""
     @property
diff --git a/wqflask/tests/unit/utility/test_chunks.py b/wqflask/tests/unit/utility/test_chunks.py
index 8d90a1ec..1d349193 100644
--- a/wqflask/tests/unit/utility/test_chunks.py
+++ b/wqflask/tests/unit/utility/test_chunks.py
@@ -7,6 +7,7 @@ from utility.chunks import divide_into_chunks
 
 class TestChunks(unittest.TestCase):
     "Test Utility method for chunking"
+
     def test_divide_into_chunks(self):
         "Check that a list is chunked correctly"
         self.assertEqual(divide_into_chunks([1, 2, 7, 3, 22, 8, 5, 22, 333], 3),
diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_display_mapping_results.py b/wqflask/tests/unit/wqflask/marker_regression/test_display_mapping_results.py
index 8ae0f09f..219a6a29 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_display_mapping_results.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_display_mapping_results.py
@@ -9,6 +9,7 @@ from wqflask.marker_regression.display_mapping_results import (
 
 class TestDisplayMappingResults(unittest.TestCase):
     """Basic Methods to test Mapping Results"""
+
     def test_pil_colors(self):
         """Test that colors use PILLOW color format"""
         self.assertEqual(DisplayMappingResults.CLICKABLE_WEBQTL_REGION_COLOR,
@@ -17,6 +18,7 @@ class TestDisplayMappingResults(unittest.TestCase):
 
 class TestHtmlGenWrapper(unittest.TestCase):
     """Test Wrapper around HTMLGen"""
+
     def test_create_image(self):
         """Test HT.Image method"""
         self.assertEqual(
diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py
index 5eec93f1..fd21a825 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_plink_mapping.py
@@ -12,9 +12,10 @@ class AttributeSetter:
     def __init__(self, obj):
         for key, val in obj.items():
             setattr(self, key, val)
-class TestPlinkMapping(unittest.TestCase):
 
 
+class TestPlinkMapping(unittest.TestCase):
+
     def test_build_line_list(self):
         """test for building line list"""
         line_1 = "this is line one test"
diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py
index bbb79f98..5cc8fd0f 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_qtlreaper_mapping.py
@@ -4,6 +4,8 @@ from wqflask.marker_regression.qtlreaper_mapping import gen_pheno_txt_file
 
 # issues some methods in genofile object are not defined
 # modify samples should equal to vals
+
+
 class TestQtlReaperMapping(unittest.TestCase):
 	@mock.patch("wqflask.marker_regression.qtlreaper_mapping.TEMPDIR", "/home/user/data")
 	def test_gen_pheno_txt_file(self):                   
diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
index 0e617e93..6267ce9a 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
@@ -5,6 +5,7 @@ from wqflask.marker_regression.rqtl_mapping import get_trait_data_type
 from wqflask.marker_regression.rqtl_mapping import sanitize_rqtl_phenotype
 from wqflask.marker_regression.rqtl_mapping import sanitize_rqtl_names
 
+
 class TestRqtlMapping(unittest.TestCase):
 
 	def setUp(self):
@@ -14,7 +15,6 @@ class TestRqtlMapping(unittest.TestCase):
 	def tearDown(self):
 		self.app_context.pop()
 
-
 	@mock.patch("wqflask.marker_regression.rqtl_mapping.g")
 	@mock.patch("wqflask.marker_regression.rqtl_mapping.logger")
 	def test_get_trait_data(self, mock_logger, mock_db):
diff --git a/wqflask/tests/unit/wqflask/test_collect.py b/wqflask/tests/unit/wqflask/test_collect.py
index 9a36132d..2a914fb2 100644
--- a/wqflask/tests/unit/wqflask/test_collect.py
+++ b/wqflask/tests/unit/wqflask/test_collect.py
@@ -11,6 +11,7 @@ app = Flask(__name__)
 
 class MockSession:
     """Helper class for mocking wqflask.collect.g.user_session.logged_in"""
+
     def __init__(self, is_logged_in=False):
         self.is_logged_in = is_logged_in
 
@@ -21,6 +22,7 @@ class MockSession:
 
 class MockFlaskG:
     """Helper class for mocking wqflask.collect.g.user_session"""
+
     def __init__(self, is_logged_in=False):
         self.is_logged_in = is_logged_in
 
diff --git a/wqflask/tests/wqflask/show_trait/test_show_trait.py b/wqflask/tests/wqflask/show_trait/test_show_trait.py
index 8c866874..24c3923e 100644
--- a/wqflask/tests/wqflask/show_trait/test_show_trait.py
+++ b/wqflask/tests/wqflask/show_trait/test_show_trait.py
@@ -242,7 +242,6 @@ class TestTraits(unittest.TestCase):
         self.assertEqual(get_genotype_scales(file_location), expected_results)
         mock_get_scales.assert_called_once_with(file_location)
 
-
     @mock.patch("wqflask.show_trait.show_trait.locate_ignore_error")
     def test_get_scales_from_genofile_found(self, mock_ignore_location):
         """"add test for get scales from genofile where file is found"""