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authorzsloan2021-05-27 21:09:18 +0000
committerzsloan2021-05-27 21:09:18 +0000
commitf69eb61c5f58b008233f7bee0e551fe9151c7724 (patch)
treeb1e221a16abfac9cefb9237adb30f06085c5633c /wqflask/tests
parent767ff7e97a751f164da610b2f9c536b6660ec420 (diff)
downloadgenenetwork2-f69eb61c5f58b008233f7bee0e551fe9151c7724.tar.gz
Change test_rqtl_mapping.py to account for full results being returned from the GN3 request
Diffstat (limited to 'wqflask/tests')
-rw-r--r--wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py7
1 files changed, 5 insertions, 2 deletions
diff --git a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
index a7f708e1..9a5162ae 100644
--- a/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
+++ b/wqflask/tests/unit/wqflask/marker_regression/test_rqtl_mapping.py
@@ -25,8 +25,11 @@ class TestRqtlMapping(unittest.TestCase):
mock_write_pheno_file.return_value = "pheno_filename"
mock_locate.return_value = "geno_filename"
- mock_post.return_value = {"output_file": "output_filename",
- "rqtl_cmd": "the_command"}
+ mock_post.return_value = Mock(ok=True)
+ mock_post.return_value.json.return_value = {"perm_results": [],
+ "suggestive": 3,
+ "significant": 4,
+ "results" : []}
results = run_rqtl(trait_name="the_trait", vals=[], samples=[],
dataset=dataset, mapping_scale="cM", model="normal", method="hk",