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authorzsloan2020-09-22 16:50:07 -0500
committerzsloan2020-09-22 16:50:07 -0500
commitbb146e6d6d8fefa2f588bbaaede9867a4f132e4d (patch)
tree406ebbe6ee9b17edcce6725643171ee8c583b881 /wqflask/tests/utility/test_authentication_tools.py
parent00cefa3d42c3e2b6633573eb124e1bcf68cea7ab (diff)
parent28b348c9956d21228d01cac6c3668e5ea7abf2e2 (diff)
downloadgenenetwork2-bb146e6d6d8fefa2f588bbaaede9867a4f132e4d.tar.gz
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing
Diffstat (limited to 'wqflask/tests/utility/test_authentication_tools.py')
-rw-r--r--wqflask/tests/utility/test_authentication_tools.py193
1 files changed, 193 insertions, 0 deletions
diff --git a/wqflask/tests/utility/test_authentication_tools.py b/wqflask/tests/utility/test_authentication_tools.py
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+++ b/wqflask/tests/utility/test_authentication_tools.py
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+"""Tests for authentication tools"""
+import unittest
+import mock
+
+from utility.authentication_tools import check_resource_availability
+from utility.authentication_tools import add_new_resource
+
+
+class TestResponse:
+ """Mock Test Response after a request"""
+ @property
+ def content(self):
+ """Mock the content from Requests.get(params).content"""
+ return '["foo"]'
+
+
+class TestUser:
+ """Mock user"""
+ @property
+ def user_id(self):
+ """Mockes user id. Used in Flask.g.user_session.user_id"""
+ return "Jane"
+
+
+class TestUserSession:
+ """Mock user session"""
+ @property
+ def user_session(self):
+ """Mock user session. Mocks Flask.g.user_session object"""
+ return TestUser()
+
+
+def mock_add_resource(resource_ob, update=False):
+ return resource_ob
+
+
+class TestCheckResourceAvailability(unittest.TestCase):
+ """Test methods related to checking the resource availability"""
+ @mock.patch('utility.authentication_tools.add_new_resource')
+ @mock.patch('utility.authentication_tools.Redis')
+ @mock.patch('utility.authentication_tools.g')
+ @mock.patch('utility.authentication_tools.get_resource_id')
+ def test_check_resource_availability_default_mask(
+ self,
+ resource_id_mock,
+ g_mock,
+ redis_mock,
+ add_new_resource_mock):
+ """Test the resource availability with default mask"""
+ resource_id_mock.return_value = 1
+ g_mock.return_value = mock.Mock()
+ redis_mock.smembers.return_value = []
+ test_dataset = mock.MagicMock()
+ type(test_dataset).type = mock.PropertyMock(return_value="Test")
+ add_new_resource_mock.return_value = {"default_mask": 2}
+ self.assertEqual(check_resource_availability(test_dataset), 2)
+
+ @mock.patch('utility.authentication_tools.requests.get')
+ @mock.patch('utility.authentication_tools.add_new_resource')
+ @mock.patch('utility.authentication_tools.Redis')
+ @mock.patch('utility.authentication_tools.g')
+ @mock.patch('utility.authentication_tools.get_resource_id')
+ def test_check_resource_availability_non_default_mask(
+ self,
+ resource_id_mock,
+ g_mock,
+ redis_mock,
+ add_new_resource_mock,
+ requests_mock):
+ """Test the resource availability with default mask"""
+ resource_id_mock.return_value = 1
+ g_mock.return_value = mock.Mock()
+ redis_mock.smembers.return_value = []
+ add_new_resource_mock.return_value = {"default_mask": 2}
+ requests_mock.return_value = TestResponse()
+ test_dataset = mock.MagicMock()
+ type(test_dataset).type = mock.PropertyMock(return_value="Test")
+ self.assertEqual(check_resource_availability(test_dataset),
+ ['foo'])
+
+ @mock.patch('utility.authentication_tools.webqtlConfig.SUPER_PRIVILEGES',
+ "SUPERUSER")
+ @mock.patch('utility.authentication_tools.requests.get')
+ @mock.patch('utility.authentication_tools.add_new_resource')
+ @mock.patch('utility.authentication_tools.Redis')
+ @mock.patch('utility.authentication_tools.g', TestUserSession())
+ @mock.patch('utility.authentication_tools.get_resource_id')
+ def test_check_resource_availability_of_super_user(
+ self,
+ resource_id_mock,
+ redis_mock,
+ add_new_resource_mock,
+ requests_mock):
+ """Test the resource availability if the user is the super user"""
+ resource_id_mock.return_value = 1
+ redis_mock.smembers.return_value = ["Jane"]
+ add_new_resource_mock.return_value = {"default_mask": 2}
+ requests_mock.return_value = TestResponse()
+ test_dataset = mock.MagicMock()
+ type(test_dataset).type = mock.PropertyMock(return_value="Test")
+ self.assertEqual(check_resource_availability(test_dataset),
+ "SUPERUSER")
+
+ @mock.patch('utility.authentication_tools.webqtlConfig.DEFAULT_PRIVILEGES',
+ "John Doe")
+ def test_check_resource_availability_string_dataset(self):
+ """Test the resource availability if the dataset is a string"""
+ self.assertEqual(check_resource_availability("Test"),
+ "John Doe")
+
+ @mock.patch('utility.authentication_tools.webqtlConfig.DEFAULT_PRIVILEGES',
+ "John Doe")
+ def test_check_resource_availability_temp(self):
+ """Test the resource availability if the dataset is a string"""
+ test_dataset = mock.MagicMock()
+ type(test_dataset).type = mock.PropertyMock(return_value="Temp")
+ self.assertEqual(check_resource_availability(test_dataset),
+ "John Doe")
+
+
+class TestAddNewResource(unittest.TestCase):
+ """Test cases for add_new_resource method"""
+ @mock.patch('utility.authentication_tools.webqtlConfig.DEFAULT_PRIVILEGES',
+ "John Doe")
+ @mock.patch('utility.authentication_tools.add_resource', mock_add_resource)
+ @mock.patch('utility.authentication_tools.get_group_code')
+ def test_add_new_resource_if_publish_datatype(self, group_code_mock):
+ """Test add_new_resource if dataset type is 'publish'"""
+ group_code_mock.return_value = "Test"
+ test_dataset = mock.MagicMock()
+ type(test_dataset).type = mock.PropertyMock(return_value="Publish")
+ type(test_dataset).id = mock.PropertyMock(return_value=10)
+ expected_value = {
+ "owner_id": "none",
+ "default_mask": "John Doe",
+ "group_masks": {},
+ "name": "Test_None",
+ "data": {
+ "dataset": 10,
+ "trait": None
+ },
+ "type": "dataset-publish"
+ }
+ self.assertEqual(add_new_resource(test_dataset),
+ expected_value)
+
+ @mock.patch('utility.authentication_tools.webqtlConfig.DEFAULT_PRIVILEGES',
+ "John Doe")
+ @mock.patch('utility.authentication_tools.add_resource', mock_add_resource)
+ @mock.patch('utility.authentication_tools.get_group_code')
+ def test_add_new_resource_if_geno_datatype(self, group_code_mock):
+ """Test add_new_resource if dataset type is 'geno'"""
+ group_code_mock.return_value = "Test"
+ test_dataset = mock.MagicMock()
+ type(test_dataset).name = mock.PropertyMock(return_value="Geno")
+ type(test_dataset).type = mock.PropertyMock(return_value="Geno")
+ type(test_dataset).id = mock.PropertyMock(return_value=20)
+ expected_value = {
+ "owner_id": "none",
+ "default_mask": "John Doe",
+ "group_masks": {},
+ "name": "Geno",
+ "data": {
+ "dataset": 20,
+ },
+ "type": "dataset-geno"
+ }
+ self.assertEqual(add_new_resource(test_dataset),
+ expected_value)
+
+ @mock.patch('utility.authentication_tools.webqtlConfig.DEFAULT_PRIVILEGES',
+ "John Doe")
+ @mock.patch('utility.authentication_tools.add_resource', mock_add_resource)
+ @mock.patch('utility.authentication_tools.get_group_code')
+ def test_add_new_resource_if_other_datatype(self, group_code_mock):
+ """Test add_new_resource if dataset type is not 'geno' or 'publish'"""
+ group_code_mock.return_value = "Test"
+ test_dataset = mock.MagicMock()
+ type(test_dataset).name = mock.PropertyMock(return_value="Geno")
+ type(test_dataset).type = mock.PropertyMock(return_value="other")
+ type(test_dataset).id = mock.PropertyMock(return_value=20)
+ expected_value = {
+ "owner_id": "none",
+ "default_mask": "John Doe",
+ "group_masks": {},
+ "name": "Geno",
+ "data": {
+ "dataset": 20,
+ },
+ "type": "dataset-probeset"
+ }
+ self.assertEqual(add_new_resource(test_dataset),
+ expected_value)