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author | zsloan | 2022-02-24 21:53:56 +0000 |
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committer | zsloan | 2022-02-24 16:02:06 -0600 |
commit | 6496f75af521d6801c25de682d2852e14d597fed (patch) | |
tree | 84e169a18d30eaa88aa54d21358576c9a4c58b73 /wqflask/tests/integration | |
parent | bbeba72a82e0a5698b4fb413430203e8aaee1830 (diff) | |
download | genenetwork2-6496f75af521d6801c25de682d2852e14d597fed.tar.gz |
Fix ProbeSet query for aliases
ProbeSet queries previously weren't dealing with aliases correctly,
because it was doing a MATCH/AGAINST against the ProbeSet.alias field,
but that field usually contains a list of gene symbols separated by
semi-colons (so it wouldn't detect the alias unless there was only a
single alias.
To fix this, I added some LIKE conditions, searching for the possible
variations. This is a little awkward, because I needed to make sure to
avoid a situation where, for example, an alias like 'LPD-1' matches a
search for 'PD-1'. I don't think the way it currently works is
efficient, but I don't know of any good alternative without changing the
way we store aliases in the database.
Diffstat (limited to 'wqflask/tests/integration')
0 files changed, 0 insertions, 0 deletions