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authorLei Yan2016-02-25 16:42:15 +0000
committerLei Yan2016-02-25 16:42:15 +0000
commite55f38a72d47fbdf5f652a08e8da1db78f1dcdb5 (patch)
tree68161b76858cf72f7a7b5576de6384042e214d8e /wqflask/output/HLC_output1.log.txt
parent7263c52a7d903a2dbdd5d05411821ec960961b4d (diff)
parentece60a2d25ed71980121ac1c1854c3ab3514f453 (diff)
downloadgenenetwork2-e55f38a72d47fbdf5f652a08e8da1db78f1dcdb5.tar.gz
Merge /home/zas1024/gene
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-##
-## GEMMA Version = 0.94
-##
-## Command Line Input = -bfile /home/zas1024/gene/web/gemma/HLC -k ../web/gemma/output_HLC.cXX.txt -lmm 1 -o HLC_output1
-##
-## Summary Statistics:
-## number of total individuals = 427
-## number of analyzed individuals = 427
-## number of covariates = 1
-## number of phenotypes = 1
-## number of total SNPs = 358499
-## number of analyzed SNPs = 273349
-## REMLE log-likelihood in the null model = -3657.8
-## MLE log-likelihood in the null model = -3665.89
-## pve estimate in the null model = 3.30749e-06
-## se(pve) in the null model = nan
-## vg estimate in the null model = 16.8101
-## ve estimate in the null model = 1.68101e+06
-## beta estimate in the null model = 890.587
-## se(beta) = 62.7439
-##
-## Computation Time:
-## total computation time = 1.857 min
-## computation time break down:
-## time on eigen-decomposition = 0.0015 min
-## time on calculating UtX = 0.406 min
-## time on optimization = 1.30517 min
-##