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authorLei Yan2016-02-25 16:42:15 +0000
committerLei Yan2016-02-25 16:42:15 +0000
commite55f38a72d47fbdf5f652a08e8da1db78f1dcdb5 (patch)
tree68161b76858cf72f7a7b5576de6384042e214d8e /wqflask/output/HLC_output.log.txt
parent7263c52a7d903a2dbdd5d05411821ec960961b4d (diff)
parentece60a2d25ed71980121ac1c1854c3ab3514f453 (diff)
downloadgenenetwork2-e55f38a72d47fbdf5f652a08e8da1db78f1dcdb5.tar.gz
Merge /home/zas1024/gene
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-##
-## GEMMA Version = 0.94
-##
-## Command Line Input = -bfile /home/zas1024/gene/web/gemma/HLC -k ../web/gemma/output_HLC.cXX.txt -lmm 1 -o HLC_output
-##
-## Summary Statistics:
-## number of total individuals = 427
-## number of analyzed individuals = 427
-## number of covariates = 1
-## number of phenotypes = 1
-## number of total SNPs = 358499
-## number of analyzed SNPs = 273349
-## REMLE log-likelihood in the null model = -3650.56
-## MLE log-likelihood in the null model = -3657.67
-## pve estimate in the null model = 0.840196
-## se(pve) in the null model = 0.106606
-## vg estimate in the null model = 4.2245e+06
-## ve estimate in the null model = 265756
-## beta estimate in the null model = 1202.14
-## se(beta) = 24.9475
-##
-## Computation Time:
-## total computation time = 2.68417 min
-## computation time break down:
-## time on eigen-decomposition = 0.00166667 min
-## time on calculating UtX = 0.417 min
-## time on optimization = 2.11733 min
-##