aboutsummaryrefslogtreecommitdiff
path: root/wqflask/maintenance
diff options
context:
space:
mode:
authorzsloan2017-12-04 17:50:14 +0000
committerzsloan2017-12-04 17:50:14 +0000
commit5813a1a3006dc67278eb094513c455b9cb2fa91f (patch)
tree34d8d12f4363326bb1505eded6126b3e7a4c5c56 /wqflask/maintenance
parent09fb1581bd403f88df403939a931c8c3bbfa1ad0 (diff)
downloadgenenetwork2-5813a1a3006dc67278eb094513c455b9cb2fa91f.tar.gz
Fixed drop-down scripts to more appropriately deal with BXD300 groups (though there's still a minor issue with a few datasets)
Added some header data to mapping output file Fixed links in Network Group nodes/edges
Diffstat (limited to 'wqflask/maintenance')
-rw-r--r--wqflask/maintenance/gen_select_dataset.py5
1 files changed, 3 insertions, 2 deletions
diff --git a/wqflask/maintenance/gen_select_dataset.py b/wqflask/maintenance/gen_select_dataset.py
index 6553f090..1123f997 100644
--- a/wqflask/maintenance/gen_select_dataset.py
+++ b/wqflask/maintenance/gen_select_dataset.py
@@ -96,13 +96,14 @@ def get_groups(species):
Cursor.execute("""select InbredSet.Name, InbredSet.FullName from InbredSet,
Species,
ProbeFreeze, GenoFreeze, PublishFreeze where Species.Name = '%s'
- and InbredSet.SpeciesId = Species.Id and InbredSet.Name != 'BXD300' and
+ and InbredSet.SpeciesId = Species.Id and
(PublishFreeze.InbredSetId = InbredSet.Id
or GenoFreeze.InbredSetId = InbredSet.Id
or ProbeFreeze.InbredSetId = InbredSet.Id)
group by InbredSet.Name
order by InbredSet.Name""" % species_name)
- groups[species_name] = list(Cursor.fetchall())
+ results = Cursor.fetchall()
+ groups[species_name] = list(results)
return groups