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authorZachary Sloan2013-04-24 19:56:39 +0000
committerZachary Sloan2013-04-24 19:56:39 +0000
commit23dbf30e4c96faae3fda19f539be2a8b260dc957 (patch)
treeda4c0ec00396be2c23fc7181afdbd7b187ae0384 /wqflask/maintenance/quick_search_table.py
parent4e6722beb4302bf22719ad783443767bb1ba7f6a (diff)
downloadgenenetwork2-23dbf30e4c96faae3fda19f539be2a8b260dc957.tar.gz
Checking in quick_search_table.py before using pylin
Diffstat (limited to 'wqflask/maintenance/quick_search_table.py')
-rw-r--r--wqflask/maintenance/quick_search_table.py13
1 files changed, 7 insertions, 6 deletions
diff --git a/wqflask/maintenance/quick_search_table.py b/wqflask/maintenance/quick_search_table.py
index 9ea8d2a3..aa40badf 100644
--- a/wqflask/maintenance/quick_search_table.py
+++ b/wqflask/maintenance/quick_search_table.py
@@ -136,7 +136,7 @@ class PublishXRef(Base):
"Phenotype.Original_description as description, "
"PublishXRef.LRS as lrs, "
"PublishXRef.PublicationId as publication_id, "
- "Publication.PubMed_ID, "
+ "Publication.PubMed_ID as pubmed_id, "
"Publication.Year as year, "
"Publication.Authors as authors "
"FROM PublishXRef, "
@@ -450,11 +450,12 @@ QuickSearch = sa.Table("QuickSearch", Metadata,
sa.Column('the_key', sa.String(30),
primary_key=True, nullable=False, autoincrement=False), # key in database table
sa.Column('terms', sa.Text), # terms to compare search string with
- sa.Column('result_fields', sa.Text) # json
+ sa.Column('result_fields', sa.Text), # json
+ mysql_engine = 'MyISAM',
)
-QuickSearch.drop(Engine, checkfirst=True)
-Metadata.create_all(Engine)
+#QuickSearch.drop(Engine, checkfirst=True)
+#Metadata.create_all(Engine)
def row2dict(row):
@@ -476,8 +477,8 @@ def page_query(q):
def main():
- ProbeSetXRef.run()
- GenoXRef.run()
+ #ProbeSetXRef.run()
+ #GenoXRef.run()
PublishXRef.run()
if __name__ == "__main__":