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| author | BonfaceKilz | 2020-08-19 03:01:33 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-08-19 03:01:33 +0300 |
| commit | e63331da5ed0a11f2a558d799dd570bf44ad584e (patch) | |
| tree | 0828f16ac423a9f1ba3f903316cac17c7ab57db5 /wqflask/maintenance/quantile_normalize.py | |
| parent | e55b1502340cc99cd8a5d705261a5ff3c87f3718 (diff) | |
| download | genenetwork2-e63331da5ed0a11f2a558d799dd570bf44ad584e.tar.gz | |
Replace `izip` with python's built-in equivalent
Run `2to3-3.8 -f itertools -w . && 2to3-3.8 -f itertools_imports -w .`
See: <https://docs.python.org/2/library/2to3.html#2to3fixer-itertools_imports>
and <https://docs.python.org/2/library/2to3.html#2to3fixer-itertools>
Diffstat (limited to 'wqflask/maintenance/quantile_normalize.py')
| -rw-r--r-- | wqflask/maintenance/quantile_normalize.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/maintenance/quantile_normalize.py b/wqflask/maintenance/quantile_normalize.py index 41a3aad8..34886f44 100644 --- a/wqflask/maintenance/quantile_normalize.py +++ b/wqflask/maintenance/quantile_normalize.py @@ -3,7 +3,7 @@ from __future__ import absolute_import, print_function, division import sys sys.path.insert(0,'./') -from itertools import izip + import MySQLdb import urlparse @@ -60,7 +60,7 @@ def set_data(dataset_name): sample_list = [] with open(orig_file, 'r') as orig_fh, open('/home/zas1024/cfw_data/quant_norm.csv', 'r') as quant_fh: - for i, (line1, line2) in enumerate(izip(orig_fh, quant_fh)): + for i, (line1, line2) in enumerate(zip(orig_fh, quant_fh)): trait_dict = {} sample_list = [] if i == 0: |