about summary refs log tree commit diff
path: root/wqflask/maintenance/quantile_normalize.py
diff options
context:
space:
mode:
authorBonfaceKilz2020-08-20 16:35:17 +0300
committerBonfaceKilz2020-08-20 16:35:17 +0300
commit1f4fb6b24f3508d80be1f07cd62e38ac9385ef41 (patch)
treebbe3a5966fb4c57b3e10b5550c1cc9c4d90d1b51 /wqflask/maintenance/quantile_normalize.py
parentb32004bc517d9a58be52662297e541c23f60355b (diff)
downloadgenenetwork2-1f4fb6b24f3508d80be1f07cd62e38ac9385ef41.tar.gz
Handle module renames in the standard library
Run:
```
2to3-3.8 -f imports -w . && \
2to3-3.8 -f imports2 -w .
```

See: <https://docs.python.org/2/library/2to3.html#2to3fixer-imports> and
<https://docs.python.org/2/library/2to3.html#2to3fixer-imports2>
Diffstat (limited to 'wqflask/maintenance/quantile_normalize.py')
-rw-r--r--wqflask/maintenance/quantile_normalize.py4
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/maintenance/quantile_normalize.py b/wqflask/maintenance/quantile_normalize.py
index 43edfd13..4d6e03bf 100644
--- a/wqflask/maintenance/quantile_normalize.py
+++ b/wqflask/maintenance/quantile_normalize.py
@@ -6,7 +6,7 @@ sys.path.insert(0, './')
 
 
 import MySQLdb
-import urlparse
+import urllib.parse
 
 import numpy as np
 import pandas as pd
@@ -22,7 +22,7 @@ from utility.tools import ELASTICSEARCH_HOST, ELASTICSEARCH_PORT, SQL_URI
 def parse_db_uri():
     """Converts a database URI to the db name, host name, user name, and password"""
 
-    parsed_uri = urlparse.urlparse(SQL_URI)
+    parsed_uri = urllib.parse.urlparse(SQL_URI)
 
     db_conn_info = dict(
                         db = parsed_uri.path[1:],