Created file gen_group_samplelists that iterates through all genofiles

and builds each groups' samplelist

1 files changed, 3 insertions, 1 deletions

diff --git a/wqflask/maintenance/gen_select_dataset.py b/wqflask/maintenance/gen_select_dataset.py
index 8cb94f20..d4e47327 100644
--- a/wqflask/maintenance/gen_select_dataset.py
+++ b/wqflask/maintenance/gen_select_dataset.py
@@ -115,7 +115,7 @@ def build_types(species, group):
     (all types except phenotype/genotype are tissues)
      
     """
-    Cursor.execute("""select distinct Tissue.Name, Tissue.Name
+    Cursor.execute("""select distinct Tissue.Name, concat(Tissue.Name, ' mRNA')
                        from ProbeFreeze, ProbeSetFreeze, InbredSet, Tissue, Species
                        where Species.Name = %s and Species.Id = InbredSet.SpeciesId and
                        InbredSet.Name = %s and
@@ -192,6 +192,8 @@ def main():
                 datasets=datasets,
                 )
 
+    print("data:", data)
+
     output_file = """../wqflask/static/new/javascript/dataset_menu_structure.json"""
 
     with open(output_file, 'w') as fh: