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| author | BonfaceKilz | 2021-04-30 12:26:19 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2021-04-30 13:45:15 +0300 |
| commit | 406eb27859cca232a562c722cbbd37aca2e3be84 (patch) | |
| tree | ba3fba783e33cc56c535b68bd64d757bc6cde608 /wqflask/maintenance/convert_geno_to_bimbam.py | |
| parent | c7e661b8ff9f70955418fbc4527378904beb0cf4 (diff) | |
| download | genenetwork2-406eb27859cca232a562c722cbbd37aca2e3be84.tar.gz | |
autopep8: Fix E301,E302,E303,E304,E305,E306
Diffstat (limited to 'wqflask/maintenance/convert_geno_to_bimbam.py')
| -rw-r--r-- | wqflask/maintenance/convert_geno_to_bimbam.py | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/wqflask/maintenance/convert_geno_to_bimbam.py b/wqflask/maintenance/convert_geno_to_bimbam.py index dc01cbb3..5b2369c9 100644 --- a/wqflask/maintenance/convert_geno_to_bimbam.py +++ b/wqflask/maintenance/convert_geno_to_bimbam.py @@ -20,8 +20,10 @@ import simplejson as json from pprint import pformat as pf + class EmptyConfigurations(Exception): pass + class Marker: def __init__(self): self.name = None @@ -30,6 +32,7 @@ class Marker: self.Mb = None self.genotypes = [] + class ConvertGenoFile: def __init__(self, input_file, output_files): @@ -178,6 +181,7 @@ class ConvertGenoFile: print(" Row is:", convertob.latest_row_value) break + if __name__ == "__main__": Old_Geno_Directory = """/export/local/home/zas1024/gn2-zach/genotype_files/genotype""" New_Geno_Directory = """/export/local/home/zas1024/gn2-zach/genotype_files/genotype/bimbam""" |