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author | Pjotr Prins | 2016-06-21 08:59:26 +0000 |
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committer | Pjotr Prins | 2016-06-21 08:59:26 +0000 |
commit | aa638a88e843657bb80f1db1e726b6135cefd11f (patch) | |
tree | de3e838a3ea33a646823a96726edc1bb4bac66fb /wqflask/dbFunction | |
parent | 2bae8718f4d4ec185586d12ae007f79a8dd89136 (diff) | |
download | genenetwork2-aa638a88e843657bb80f1db1e726b6135cefd11f.tar.gz |
Logger: SQL
Diffstat (limited to 'wqflask/dbFunction')
-rw-r--r-- | wqflask/dbFunction/webqtlDatabaseFunction.py | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/wqflask/dbFunction/webqtlDatabaseFunction.py b/wqflask/dbFunction/webqtlDatabaseFunction.py index d7e160d0..4a0fb40f 100644 --- a/wqflask/dbFunction/webqtlDatabaseFunction.py +++ b/wqflask/dbFunction/webqtlDatabaseFunction.py @@ -47,7 +47,7 @@ def getCursor(): except: return None -def fetchone(callername,query): +def fetchone(query): """Return tuple containing one row by calling SQL directly """ @@ -55,6 +55,7 @@ def fetchone(callername,query): def helper(query): res = g.db.execute(query) return res.fetchone() + callername = stack()[1][3] return logger.sql(callername, query, helper) def gn_server(path): @@ -73,10 +74,10 @@ def retrieve_species(group): """ if USE_GN_SERVER: - result = gn_server("/cross/"+group) + result = gn_server("/cross/"+group+".json") return result["species"] else: - result = fetchone(stack()[0][3],"select Species.Name from Species, InbredSet where InbredSet.Name = '%s' and InbredSet.SpeciesId = Species.Id" % (group)) + result = fetchone("select Species.Name from Species, InbredSet where InbredSet.Name = '%s' and InbredSet.SpeciesId = Species.Id" % (group)) return result[0] ########################################################################### |