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author | BonfaceKilz | 2021-04-30 12:26:19 +0300 |
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committer | BonfaceKilz | 2021-04-30 13:45:15 +0300 |
commit | 406eb27859cca232a562c722cbbd37aca2e3be84 (patch) | |
tree | ba3fba783e33cc56c535b68bd64d757bc6cde608 /wqflask/db | |
parent | c7e661b8ff9f70955418fbc4527378904beb0cf4 (diff) | |
download | genenetwork2-406eb27859cca232a562c722cbbd37aca2e3be84.tar.gz |
autopep8: Fix E301,E302,E303,E304,E305,E306
Diffstat (limited to 'wqflask/db')
-rw-r--r-- | wqflask/db/call.py | 4 | ||||
-rw-r--r-- | wqflask/db/gn_server.py | 1 | ||||
-rw-r--r-- | wqflask/db/webqtlDatabaseFunction.py | 1 |
3 files changed, 6 insertions, 0 deletions
diff --git a/wqflask/db/call.py b/wqflask/db/call.py index 555878ad..9412b376 100644 --- a/wqflask/db/call.py +++ b/wqflask/db/call.py @@ -16,6 +16,7 @@ logger = getLogger(__name__) # from inspect import stack + def fetch1(query, path=None, func=None): """Fetch one result as a Tuple using either a SQL query or the URI path to GN_SERVER (when USE_GN_SERVER is True). Apply func to @@ -35,6 +36,7 @@ GN_SERVER result when set (which should return a Tuple) else: return fetchone(query) + def fetchone(query): """Return tuple containing one row by calling SQL directly (the original fetchone, but with logging) @@ -46,6 +48,7 @@ original fetchone, but with logging) return res.fetchone() return logger.sql(query, helper) + def fetchall(query): """Return row iterator by calling SQL directly (the original fetchall, but with logging) @@ -57,6 +60,7 @@ original fetchall, but with logging) return res.fetchall() return logger.sql(query, helper) + def gn_server(path): """Return JSON record by calling GN_SERVER diff --git a/wqflask/db/gn_server.py b/wqflask/db/gn_server.py index 6c7383d0..f9b01658 100644 --- a/wqflask/db/gn_server.py +++ b/wqflask/db/gn_server.py @@ -5,5 +5,6 @@ from db.call import gn_server from utility.logger import getLogger logger = getLogger(__name__) + def menu_main(): return gn_server("/int/menu/main.json") diff --git a/wqflask/db/webqtlDatabaseFunction.py b/wqflask/db/webqtlDatabaseFunction.py index 18ade405..50ac06fd 100644 --- a/wqflask/db/webqtlDatabaseFunction.py +++ b/wqflask/db/webqtlDatabaseFunction.py @@ -31,6 +31,7 @@ logger = getLogger(__name__) # function: connect to database and return cursor instance ########################################################################### + def retrieve_species(group): """Get the species of a group (e.g. returns string "mouse" on "BXD" |