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authoracenteno2020-04-21 17:35:34 -0500
committerGitHub2020-04-21 17:35:34 -0500
commit660589b9c2a507529e8e51ca6ce66ca97ad982c5 (patch)
tree27f63957278581bc2fce2b88744bfe20c8a81558 /wqflask/db/webqtlDatabaseFunction.py
parentd97fdc18359233f07c1a1c7b83fe7e88eb225043 (diff)
parentf2a3ae13231a7d270a5bb6911c248aa713f1ef91 (diff)
downloadgenenetwork2-660589b9c2a507529e8e51ca6ce66ca97ad982c5.tar.gz
Merge pull request #1 from genenetwork/testing
Updating my testing branch
Diffstat (limited to 'wqflask/db/webqtlDatabaseFunction.py')
-rw-r--r--wqflask/db/webqtlDatabaseFunction.py8
1 files changed, 0 insertions, 8 deletions
diff --git a/wqflask/db/webqtlDatabaseFunction.py b/wqflask/db/webqtlDatabaseFunction.py
index ba998e91..8a9dc79d 100644
--- a/wqflask/db/webqtlDatabaseFunction.py
+++ b/wqflask/db/webqtlDatabaseFunction.py
@@ -30,14 +30,6 @@ logger = getLogger(__name__ )
#output: cursor instance
#function: connect to database and return cursor instance
###########################################################################
-def getCursor():
- try:
- logger.warning("Creating new MySQLdb cursor (this method is OBSOLETE!)")
- con = MySQLdb.Connect(db=webqtlConfig.DB_NAME, host=webqtlConfig.MYSQL_SERVER, user=webqtlConfig.DB_USER, passwd=webqtlConfig.DB_PASSWD)
- cursor = con.cursor()
- return cursor
- except:
- return None
def retrieve_species(group):
"""Get the species of a group (e.g. returns string "mouse" on "BXD"