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| author | zsloan | 2020-10-29 14:35:09 -0500 |
|---|---|---|
| committer | zsloan | 2020-10-29 14:35:09 -0500 |
| commit | 7c1c9e2a519ba662e9f293eea73eb7922b2160e4 (patch) | |
| tree | f6d4db465d338c1433bbb126e911062a6c31748b /wqflask/db/webqtlDatabaseFunction.py | |
| parent | 5a1f69aa85809768577069ae63d92c9ef6aecc02 (diff) | |
| parent | 6e6911b466c2727b16a190d8b714f55d7842d7e2 (diff) | |
| download | genenetwork2-7c1c9e2a519ba662e9f293eea73eb7922b2160e4.tar.gz | |
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into reaper_bootstrap_fix
Diffstat (limited to 'wqflask/db/webqtlDatabaseFunction.py')
| -rw-r--r-- | wqflask/db/webqtlDatabaseFunction.py | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/wqflask/db/webqtlDatabaseFunction.py b/wqflask/db/webqtlDatabaseFunction.py index 8a9dc79d..2805febd 100644 --- a/wqflask/db/webqtlDatabaseFunction.py +++ b/wqflask/db/webqtlDatabaseFunction.py @@ -35,13 +35,13 @@ def retrieve_species(group): """Get the species of a group (e.g. returns string "mouse" on "BXD" """ - result = fetch1("select Species.Name from Species, InbredSet where InbredSet.Name = '%s' and InbredSet.SpeciesId = Species.Id" % (group),"/cross/"+group+".json",lambda r: (r["species"],))[0] - logger.debug("retrieve_species result:",result) + result = fetch1("select Species.Name from Species, InbredSet where InbredSet.Name = '%s' and InbredSet.SpeciesId = Species.Id" % (group), "/cross/"+group+".json", lambda r: (r["species"],))[0] + logger.debug("retrieve_species result:", result) return result def retrieve_species_id(group): - result = fetch1("select SpeciesId from InbredSet where Name = '%s'" % (group),"/cross/"+group+".json",lambda r: (r["species_id"],))[0] - logger.debug("retrieve_species_id result:",result) + result = fetch1("select SpeciesId from InbredSet where Name = '%s'" % (group), "/cross/"+group+".json", lambda r: (r["species_id"],))[0] + logger.debug("retrieve_species_id result:", result) return result |