aboutsummaryrefslogtreecommitdiff
path: root/wqflask/dataSharing/SharingInfoUpdatePage.py
diff options
context:
space:
mode:
authorSam Ockman2012-06-29 18:24:50 -0400
committerSam Ockman2012-06-29 18:24:50 -0400
commit243a0ff8a0926f9653d8196613d55fe8abdba871 (patch)
treea1b7a84fdd878a1a1281ccd16b3e8c6eae7a8d68 /wqflask/dataSharing/SharingInfoUpdatePage.py
parentd67019ce6d763b983d17b6bd2fb573f61618ea09 (diff)
downloadgenenetwork2-243a0ff8a0926f9653d8196613d55fe8abdba871.tar.gz
removed some previously deleted files
Diffstat (limited to 'wqflask/dataSharing/SharingInfoUpdatePage.py')
-rwxr-xr-xwqflask/dataSharing/SharingInfoUpdatePage.py109
1 files changed, 0 insertions, 109 deletions
diff --git a/wqflask/dataSharing/SharingInfoUpdatePage.py b/wqflask/dataSharing/SharingInfoUpdatePage.py
deleted file mode 100755
index a70238b9..00000000
--- a/wqflask/dataSharing/SharingInfoUpdatePage.py
+++ /dev/null
@@ -1,109 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-import MySQLdb
-
-from base.templatePage import templatePage
-from base import webqtlConfig
-from dbFunction import webqtlDatabaseFunction
-import SharingBody
-import SharingInfo
-
-#########################################
-# Sharing Info Update Page
-#########################################
-class SharingInfoUpdatePage(templatePage):
-
- def __init__(self, fd=None):
- templatePage.__init__(self, fd)
- if webqtlConfig.USERDICT[self.privilege] >= webqtlConfig.USERDICT['admin']:
- pass
- else:
- heading = "Editing Info"
- detail = ["You don't have the permission to modify this file"]
- self.error(heading=heading,detail=detail,error="Error")
- return
- cursor = webqtlDatabaseFunction.getCursor()
- if (not cursor):
- return
- Id=fd.formdata.getvalue('Id')
- GN_AccesionId=fd.formdata.getvalue('GN_AccesionId')
- GEO_Series=fd.formdata.getvalue('GEO_Series')
- Status=fd.formdata.getvalue('Status')
- Title=fd.formdata.getvalue('Title')
- Organism_Id=fd.formdata.getvalue('Organism_Id')
- Organism=fd.formdata.getvalue('Organism')
- Experiment_Type =fd.formdata.getvalue('Experiment_Type')
- Summary=fd.formdata.getvalue('Summary')
- Overall_Design=fd.formdata.getvalue('Overall_Design')
- Contributor=fd.formdata.getvalue('Contributor')
- Citation=fd.formdata.getvalue('Citation')
- Submission_Date=fd.formdata.getvalue('Submission_Date')
- Contact_Name=fd.formdata.getvalue('Contact_Name')
- Emails=fd.formdata.getvalue('Emails')
- Phone=fd.formdata.getvalue('Phone')
- URL=fd.formdata.getvalue('URL')
- Organization_Name=fd.formdata.getvalue('Organization_Name')
- Department=fd.formdata.getvalue('Department')
- Laboratory=fd.formdata.getvalue('Laboratory')
- Street=fd.formdata.getvalue('Street')
- City=fd.formdata.getvalue('City')
- State=fd.formdata.getvalue('State')
- ZIP=fd.formdata.getvalue('ZIP')
- Country=fd.formdata.getvalue('Country')
- Platforms=fd.formdata.getvalue('Platforms')
- Samples=fd.formdata.getvalue('Samples')
- Species=fd.formdata.getvalue('Species')
- Tissue=fd.formdata.getvalue('Tissue')
- Normalization=fd.formdata.getvalue('Normalization')
- InbredSet=fd.formdata.getvalue('InbredSet')
- InfoPageName=fd.formdata.getvalue('InfoPageName')
- InfoPageTitle=fd.formdata.getvalue('InfoPageTitle')
- About_Cases=fd.formdata.getvalue('About_Cases')
- About_Tissue=fd.formdata.getvalue('About_Tissue')
- About_Download=fd.formdata.getvalue('About_Download')
- About_Array_Platform=fd.formdata.getvalue('About_Array_Platform')
- About_Data_Values_Processing=fd.formdata.getvalue('About_Data_Values_Processing')
- Data_Source_Acknowledge=fd.formdata.getvalue('Data_Source_Acknowledge')
- AuthorizedUsers=fd.formdata.getvalue('AuthorizedUsers')
- Progress=fd.formdata.getvalue('Progress')
- if Id=='-1':
- sharingInfoObject = SharingInfo.SharingInfo(GN_AccesionId, InfoPageName)
- info, filelist = sharingInfoObject.getInfo()
- if info:
- heading = "Editing Info"
- detail = ["The new dataset info record is duplicate."]
- self.error(heading=heading, detail=detail, error="Error")
- return
- sql = """INSERT INTO InfoFiles SET GN_AccesionId=%s, GEO_Series=%s, Status=%s, Title=%s, Organism_Id=%s, Organism=%s, Experiment_Type=%s, Summary=%s, Overall_Design=%s, Contributor=%s, Citation=%s, Submission_Date=%s, Contact_Name=%s, Emails=%s, Phone=%s, URL=%s, Organization_Name=%s, Department=%s, Laboratory=%s, Street=%s, City=%s, State=%s, ZIP=%s, Country=%s, Platforms=%s, Samples=%s, Species=%s, Tissue=%s, Normalization=%s, InbredSet=%s, InfoPageName=%s, InfoPageTitle=%s, About_Cases=%s, About_Tissue=%s, About_Download=%s, About_Array_Platform=%s, About_Data_Values_Processing=%s, Data_Source_Acknowledge=%s, AuthorizedUsers=%s, Progreso=%s"""
- cursor.execute(sql, tuple([GN_AccesionId, GEO_Series, Status, Title, Organism_Id, Organism, Experiment_Type, Summary, Overall_Design, Contributor, Citation, Submission_Date, Contact_Name, Emails, Phone, URL, Organization_Name, Department, Laboratory, Street, City, State, ZIP, Country, Platforms, Samples, Species, Tissue, Normalization, InbredSet, InfoPageName, InfoPageTitle, About_Cases, About_Tissue, About_Download, About_Array_Platform, About_Data_Values_Processing, Data_Source_Acknowledge, AuthorizedUsers, Progress]))
- infoupdate="This record has been succesfully added."
- else:
- sql = """UPDATE InfoFiles SET GN_AccesionId=%s, GEO_Series=%s, Status=%s, Title=%s, Organism_Id=%s, Organism=%s, Experiment_Type=%s, Summary=%s, Overall_Design=%s, Contributor=%s, Citation=%s, Submission_Date=%s, Contact_Name=%s, Emails=%s, Phone=%s, URL=%s, Organization_Name=%s, Department=%s, Laboratory=%s, Street=%s, City=%s, State=%s, ZIP=%s, Country=%s, Platforms=%s, Samples=%s, Species=%s, Tissue=%s, Normalization=%s, InbredSet=%s, InfoPageName=%s, InfoPageTitle=%s, About_Cases=%s, About_Tissue=%s, About_Download=%s, About_Array_Platform=%s, About_Data_Values_Processing=%s, Data_Source_Acknowledge=%s, AuthorizedUsers=%s, Progreso=%s WHERE Id=%s"""
- cursor.execute(sql, tuple([GN_AccesionId, GEO_Series, Status, Title, Organism_Id, Organism, Experiment_Type, Summary, Overall_Design, Contributor, Citation, Submission_Date, Contact_Name, Emails, Phone, URL, Organization_Name, Department, Laboratory, Street, City, State, ZIP, Country, Platforms, Samples, Species, Tissue, Normalization, InbredSet, InfoPageName, InfoPageTitle, About_Cases, About_Tissue, About_Download, About_Array_Platform, About_Data_Values_Processing, Data_Source_Acknowledge, AuthorizedUsers, Progress, Id]))
- infoupdate="This record has been succesfully updated."
- sharingInfoObject = SharingInfo.SharingInfo(GN_AccesionId, InfoPageName)
- self.dict['body'] = sharingInfoObject.getBody(infoupdate=infoupdate) \ No newline at end of file