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author | zsloan | 2015-06-29 13:20:37 -0500 |
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committer | zsloan | 2015-06-29 13:20:37 -0500 |
commit | 42172d04c4231f69d67c204b82cf6bc8c7b1bc10 (patch) | |
tree | 080b2197322bf13fa7953b187c8935d8c3ce6520 /wqflask/base | |
parent | b8152f98f0d9c2a1ec0d73145a4670153b60a307 (diff) | |
parent | 45ebe51fbee7da1617b01cff7b9ab404d6ad1aa7 (diff) | |
download | genenetwork2-42172d04c4231f69d67c204b82cf6bc8c7b1bc10.tar.gz |
Merge pull request #72 from lomereiter/issue69
Fixes #69
Diffstat (limited to 'wqflask/base')
-rwxr-xr-x | wqflask/base/data_set.py | 6 | ||||
-rwxr-xr-x | wqflask/base/trait.py | 9 |
2 files changed, 7 insertions, 8 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 14a2a388..d46e4363 100755 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -392,6 +392,12 @@ class DatasetGroup(object): Redis.set(key, json.dumps(self.samplelist)) Redis.expire(key, 60*5) + def all_samples_ordered(self): + result = [] + lists = (self.parlist, self.f1list, self.samplelist) + [result.extend(l) for l in lists if l] + return result + def read_genotype_file(self): '''Read genotype from .geno file instead of database''' #if self.group == 'BXD300': diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index 7689a469..4a088bc8 100755 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -251,14 +251,7 @@ class GeneralTrait(object): # Todo: is this necessary? If not remove self.data.clear() - if self.dataset.group.parlist: - all_samples_ordered = (self.dataset.group.parlist + - self.dataset.group.f1list + - self.dataset.group.samplelist) - elif self.dataset.group.f1list: - all_samples_ordered = self.dataset.group.f1list + self.dataset.group.samplelist - else: - all_samples_ordered = self.dataset.group.samplelist + all_samples_ordered = self.dataset.group.all_samples_ordered() if results: for item in results: |