diff options
| author | zsloan | 2018-10-24 17:23:18 +0000 |
|---|---|---|
| committer | zsloan | 2018-10-24 17:23:18 +0000 |
| commit | 9cfb01cab4bcf6bf87ff8f7bfcf603ed349fbd87 (patch) | |
| tree | dcd87068f45f441bfc9e96efbd1f042015a98aec /wqflask/base | |
| parent | 7d1a681029e4efb73b4a0f07ac37c15764b15eb8 (diff) | |
| download | genenetwork2-9cfb01cab4bcf6bf87ff8f7bfcf603ed349fbd87.tar.gz | |
- SNP Browser is mostly complete; just need to test more and add SNP density chart if results exceed some number (5000 on GN1)
- Removed unnecessary options from the mode bar for the trait page Plotly figures and changed the default to highlight points the mouse is hovering over
- Changed some file/function names related to mapping, which previously were erroneously named "marker_regression"
Diffstat (limited to 'wqflask/base')
| -rw-r--r-- | wqflask/base/webqtlConfig.py | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py index 4708bf0a..c9052c83 100644 --- a/wqflask/base/webqtlConfig.py +++ b/wqflask/base/webqtlConfig.py @@ -34,6 +34,10 @@ PUBMEDLINK_URL = "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db= UCSC_BLAT = 'http://genome.ucsc.edu/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s' UTHSC_BLAT = 'http://ucscbrowser.genenetwork.org/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s' UTHSC_BLAT2 = 'http://ucscbrowserbeta.genenetwork.org/cgi-bin/hgBlat?org=%s&db=%s&type=0&sort=0&output=0&userSeq=%s' +GENOMEBROWSER_URL="https://genome.ucsc.edu/cgi-bin/hgTracks?db=%s&position=%s" +NCBI_LOCUSID = "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=%s" +ENSEMBLETRANSCRIPT_URL="http://useast.ensembl.org/Mus_musculus/Transcript/Idhistory?t=%s" +DBSNP = 'http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=%s' # Temporary storage (note that this TMPDIR can be set as an # environment variable - use utility.tools.TEMPDIR when you |