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| author | Zachary Sloan | 2013-02-07 17:58:34 -0600 |
|---|---|---|
| committer | Zachary Sloan | 2013-02-07 17:58:34 -0600 |
| commit | 9b0264bf13e994298de95a4e08198336b6c97a38 (patch) | |
| tree | 9d4e4773699555a93e9509fa484d6264ff4c6bfd /wqflask/base | |
| parent | d75fc63891f617fbe8b2b030fdce80b1628c6a41 (diff) | |
| download | genenetwork2-9b0264bf13e994298de95a4e08198336b6c97a38.tar.gz | |
Added code to marker_regression.py that creates the numpy arrays to
pass to Nick's code and changed the prep_data.py code to operate on
a list of phenotype values instead of a textfile with the values
delimited
Diffstat (limited to 'wqflask/base')
| -rwxr-xr-x | wqflask/base/webqtlConfig.py | 3 | ||||
| -rwxr-xr-x | wqflask/base/webqtlConfigLocal.py | 2 |
2 files changed, 3 insertions, 2 deletions
diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py index d5f09b64..d05fa6e0 100755 --- a/wqflask/base/webqtlConfig.py +++ b/wqflask/base/webqtlConfig.py @@ -55,8 +55,9 @@ HTMLPATH = GNROOT + 'web/' IMGDIR = HTMLPATH +'image/' IMAGESPATH = HTMLPATH + 'images/' UPLOADPATH = IMAGESPATH + 'upload/' -TMPDIR = '/tmp/' +TMPDIR = HTMLPATH + 'tmp/' GENODIR = HTMLPATH + 'genotypes/' +NEWGENODIR = HTMLPATH + 'new_genotypes/' GENO_ARCHIVE_DIR = GENODIR + 'archive/' TEXTDIR = HTMLPATH + 'ProbeSetFreeze_DataMatrix/' CMDLINEDIR = HTMLPATH + 'webqtl/cmdLine/' diff --git a/wqflask/base/webqtlConfigLocal.py b/wqflask/base/webqtlConfigLocal.py index 84686234..8e3e0bbe 100755 --- a/wqflask/base/webqtlConfigLocal.py +++ b/wqflask/base/webqtlConfigLocal.py @@ -12,7 +12,7 @@ DB_UPDNAME = 'db_webqtl_zas1024' DB_UPDUSER = 'webqtl' DB_UPDPASSWD = 'webqtl' -GNROOT = '/home/zas1024/gn/' +GNROOT = '/home/zas1024/gene/' ROOT_URL = 'http://alexandria.uthsc.edu:91/' PythonPath = '/usr/bin/python' PIDDLE_FONT_PATH = '/usr/lib/python2.4/site-packages/piddle/truetypefonts/' |