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| author | BonfaceKilz | 2020-09-28 02:33:09 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-09-28 02:33:09 +0300 |
| commit | 312835014d8d243c72f3520bb116eb3c36cd6b85 (patch) | |
| tree | f11a3373654016bd333c77ef4bff6d0dc26eff7d /wqflask/base | |
| parent | e247f43bf9bc31164948760694ff796bb469ae4c (diff) | |
| download | genenetwork2-312835014d8d243c72f3520bb116eb3c36cd6b85.tar.gz | |
Convert None to "" in if statement
* wqflask/base/trait.py: Fixes error parsing error: "(GeneNetwork
error: float argument required, not NoneType)"
Diffstat (limited to 'wqflask/base')
| -rw-r--r-- | wqflask/base/trait.py | 7 |
1 files changed, 3 insertions, 4 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index 7666348e..bdd9c3d6 100644 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -599,12 +599,11 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False): trait.locus = trait.locus_chr = trait.locus_mb = trait.additive = "" else: trait.locus = trait.lrs = trait.additive = "" - - if (dataset.type == 'Publish' or dataset.type == "ProbeSet") and trait.locus_chr != "" and trait.locus_mb != "": + if (dataset.type == 'Publish' or dataset.type == "ProbeSet") and str(trait.locus_chr or "") != "" and str(trait.locus_mb or "") != "": trait.LRS_location_repr = LRS_location_repr = 'Chr%s: %.6f' % (trait.locus_chr, float(trait.locus_mb)) - if trait.lrs != "": + if str(trait.lrs or "") != "": trait.LRS_score_repr = LRS_score_repr = '%3.1f' % trait.lrs else: raise KeyError, `trait.name`+' information is not found in the database.' - return trait
\ No newline at end of file + return trait |