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authorzsloan2015-11-09 17:38:50 +0000
committerzsloan2015-11-09 17:38:50 +0000
commit74ba4029f0160f0c4708a8c4b291c05184d3993d (patch)
treee7af5cb1a4849d948d4343cb9e33f75f7869a6ee /wqflask/base
parentf93874f512ee07072bab46bfacc9282df4e12172 (diff)
downloadgenenetwork2-74ba4029f0160f0c4708a8c4b291c05184d3993d.tar.gz
Fixed issue that caused mapping to not work; for some reason the path to pylmm was wrong
Diffstat (limited to 'wqflask/base')
-rwxr-xr-xwqflask/base/data_set.py5
1 files changed, 4 insertions, 1 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index d6a46c2e..5603fe2e 100755
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -158,7 +158,10 @@ class Markers(object):
"""Todo: Build in cacheing so it saves us reading the same file more than once"""
def __init__(self, name):
json_data_fh = open(os.path.join(webqtlConfig.NEWGENODIR + name + '.json'))
- markers = json.load(json_data_fh)
+ try:
+ markers = json.load(json_data_fh)
+ except:
+ markers = []
for marker in markers:
if (marker['chr'] != "X") and (marker['chr'] != "Y"):