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authorzsloan2020-04-26 10:57:09 -0500
committerzsloan2020-04-26 10:57:09 -0500
commitf0139ef93c7e8329c1a84fe9f75273c36626df0e (patch)
tree4ee1c5dabc3bb13456d66c62ba5f31ae44faafd4 /wqflask/base
parentd56ae51d72335c10e5f08c22a4e0cba1ab3547cb (diff)
downloadgenenetwork2-f0139ef93c7e8329c1a84fe9f75273c36626df0e.tar.gz
Removed the code that was still writing the database menu JSON
Diffstat (limited to 'wqflask/base')
-rw-r--r--wqflask/base/data_set.py14
1 files changed, 5 insertions, 9 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index 8652e6b7..1f99df49 100644
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -64,7 +64,7 @@ logger = getLogger(__name__ )
# Each subclass will add to this
DS_NAME_MAP = {}
-def create_dataset(dataset_name, rebuild=True, dataset_type = None, get_samplelist = True, group_name = None):
+def create_dataset(dataset_name, dataset_type = None, get_samplelist = True, group_name = None):
if not dataset_type:
dataset_type = Dataset_Getter(dataset_name)
@@ -77,7 +77,7 @@ def create_dataset(dataset_name, rebuild=True, dataset_type = None, get_sampleli
class Dataset_Types(object):
- def __init__(self, rebuild=False):
+ def __init__(self):
"""Create a dictionary of samples where the value is set to Geno,
Publish or ProbeSet. E.g.
@@ -93,13 +93,9 @@ Publish or ProbeSet. E.g.
"""
self.datasets = {}
- if rebuild: #ZS: May make this the only option
- data = json.loads(requests.get(GN2_BASE_URL + "/api/v_pre1/gen_dropdown").content)
- #data = gen_menu.gen_dropdown_json()
- else:
- file_name = "wqflask/static/new/javascript/dataset_menu_structure.json"
- with open(file_name, 'r') as fh:
- data = json.load(fh)
+ data = json.loads(requests.get(GN2_BASE_URL + "/api/v_pre1/gen_dropdown").content)
+ #data = gen_menu.gen_dropdown_json()
+
for species in data['datasets']:
for group in data['datasets'][species]: