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authorBonfaceKilz2020-09-28 02:33:09 +0300
committerBonfaceKilz2020-09-28 02:33:09 +0300
commit312835014d8d243c72f3520bb116eb3c36cd6b85 (patch)
treef11a3373654016bd333c77ef4bff6d0dc26eff7d /wqflask/base
parente247f43bf9bc31164948760694ff796bb469ae4c (diff)
downloadgenenetwork2-312835014d8d243c72f3520bb116eb3c36cd6b85.tar.gz
Convert None to "" in if statement
* wqflask/base/trait.py: Fixes error parsing error: "(GeneNetwork error: float argument required, not NoneType)"
Diffstat (limited to 'wqflask/base')
-rw-r--r--wqflask/base/trait.py7
1 files changed, 3 insertions, 4 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py
index 7666348e..bdd9c3d6 100644
--- a/wqflask/base/trait.py
+++ b/wqflask/base/trait.py
@@ -599,12 +599,11 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False):
trait.locus = trait.locus_chr = trait.locus_mb = trait.additive = ""
else:
trait.locus = trait.lrs = trait.additive = ""
-
- if (dataset.type == 'Publish' or dataset.type == "ProbeSet") and trait.locus_chr != "" and trait.locus_mb != "":
+ if (dataset.type == 'Publish' or dataset.type == "ProbeSet") and str(trait.locus_chr or "") != "" and str(trait.locus_mb or "") != "":
trait.LRS_location_repr = LRS_location_repr = 'Chr%s: %.6f' % (trait.locus_chr, float(trait.locus_mb))
- if trait.lrs != "":
+ if str(trait.lrs or "") != "":
trait.LRS_score_repr = LRS_score_repr = '%3.1f' % trait.lrs
else:
raise KeyError, `trait.name`+' information is not found in the database.'
- return trait \ No newline at end of file
+ return trait