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authorzsloan2019-06-04 11:20:28 -0500
committerzsloan2019-06-04 11:20:28 -0500
commit34d962fe1e0dd5e30f067e7a30fcbd8931f2aacb (patch)
treed8267d201fd761972a528e7033d4be5ecdda5dfe /wqflask/base/webqtlConfig.py
parent204f85b24ddb7f2556d0f4de5e68620c89d2dd75 (diff)
downloadgenenetwork2-34d962fe1e0dd5e30f067e7a30fcbd8931f2aacb.tar.gz
Added GeneMANIA link
Fixed issue that caused error when creating UCSC RefSeq link Fixed issue that sometimes caused an error for phenotype searches Changed some text on collections page
Diffstat (limited to 'wqflask/base/webqtlConfig.py')
-rw-r--r--wqflask/base/webqtlConfig.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py
index b14cc4b0..a08acb0a 100644
--- a/wqflask/base/webqtlConfig.py
+++ b/wqflask/base/webqtlConfig.py
@@ -43,6 +43,7 @@ HOMOLOGENE_ID = "http://www.ncbi.nlm.nih.gov/homologene/?term=%s"
GENOTATION_URL = "http://www.genotation.org/Getd2g.pl?gene_list=%s"
GTEX_URL = "https://www.gtexportal.org/home/gene/%s"
GENEBRIDGE_URL = "https://www.systems-genetics.org/modules_by_gene/%s?organism=%s"
+GENEMANIA_URL = "https://genemania.org/search/%s/%s"
UCSC_REFSEQ = "http://genome.cse.ucsc.edu/cgi-bin/hgTracks?db=%s&hgg_gene=%s&hgg_chrom=chr%s&hgg_start=%s&hgg_end=%s"
BIOGPS_URL = "http://biogps.org/?org=%s#goto=genereport&id=%s"
STRING_URL = "http://string-db.org/newstring_cgi/show_network_section.pl?identifier=%s"
@@ -87,4 +88,3 @@ if not valid_path(JSON_GENODIR):
PORTADDR = "http://50.16.251.170"
INFOPAGEHREF = '/dbdoc/%s.html'
CGIDIR = '/webqtl/' #XZ: The variable name 'CGIDIR' should be changed to 'PYTHONDIR'
-SCRIPTFILE = 'main.py'