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| author | Pjotr Prins | 2018-02-10 07:53:53 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2018-02-10 07:53:53 +0000 |
| commit | 97ccc478543a7bb08fe0cf178e320dd5811d8bfa (patch) | |
| tree | 65c3610e421eea8615c377d922ad63d6cd258bde /wqflask/base/webqtlConfig.py | |
| parent | 4ae2d548127eeeaa7cec0baf1b788005b5e8e51d (diff) | |
| download | genenetwork2-97ccc478543a7bb08fe0cf178e320dd5811d8bfa.tar.gz | |
Check for bimbam path and bail out if it is missing
Diffstat (limited to 'wqflask/base/webqtlConfig.py')
| -rw-r--r-- | wqflask/base/webqtlConfig.py | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py index 1ef2bc26..1e66e957 100644 --- a/wqflask/base/webqtlConfig.py +++ b/wqflask/base/webqtlConfig.py @@ -82,6 +82,7 @@ assert_writable_dir(GENERATED_TEXT_DIR) # Flat file directories GENODIR = flat_files('genotype')+'/' assert_dir(GENODIR) +assert_dir(GENODIR+'bimbam') # for gemma # JSON genotypes are OBSOLETE JSON_GENODIR = flat_files('genotype/json')+'/' |