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| author | zsloan | 2019-09-20 13:13:03 -0500 |
|---|---|---|
| committer | GitHub | 2019-09-20 13:13:03 -0500 |
| commit | a708a0097e29509b209494e21a09f49d79467750 (patch) | |
| tree | 3d8fe0530ee36ec65a72ed5196a6e0243c5c1c71 /wqflask/base/webqtlConfig.py | |
| parent | ff67d4bb0e15339697e97c918df1f1cc4385dce6 (diff) | |
| parent | 78d3086c3978525065d91c0e02f2c2e0583f8705 (diff) | |
| download | genenetwork2-a708a0097e29509b209494e21a09f49d79467750.tar.gz | |
Merge branch 'testing' into 360_update_htmlgen
Diffstat (limited to 'wqflask/base/webqtlConfig.py')
| -rw-r--r-- | wqflask/base/webqtlConfig.py | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/wqflask/base/webqtlConfig.py b/wqflask/base/webqtlConfig.py index b14cc4b0..0b884815 100644 --- a/wqflask/base/webqtlConfig.py +++ b/wqflask/base/webqtlConfig.py @@ -43,6 +43,7 @@ HOMOLOGENE_ID = "http://www.ncbi.nlm.nih.gov/homologene/?term=%s" GENOTATION_URL = "http://www.genotation.org/Getd2g.pl?gene_list=%s" GTEX_URL = "https://www.gtexportal.org/home/gene/%s" GENEBRIDGE_URL = "https://www.systems-genetics.org/modules_by_gene/%s?organism=%s" +GENEMANIA_URL = "https://genemania.org/search/%s/%s" UCSC_REFSEQ = "http://genome.cse.ucsc.edu/cgi-bin/hgTracks?db=%s&hgg_gene=%s&hgg_chrom=chr%s&hgg_start=%s&hgg_end=%s" BIOGPS_URL = "http://biogps.org/?org=%s#goto=genereport&id=%s" STRING_URL = "http://string-db.org/newstring_cgi/show_network_section.pl?identifier=%s" @@ -52,7 +53,9 @@ ABA_URL = "http://mouse.brain-map.org/search/show?search_type=gene&search_term=% EBIGWAS_URL = "https://www.ebi.ac.uk/gwas/search?query=%s" WIKI_PI_URL = "http://severus.dbmi.pitt.edu/wiki-pi/index.php/search?q=%s" ENSEMBLETRANSCRIPT_URL="http://useast.ensembl.org/Mus_musculus/Transcript/Idhistory?t=%s" -DBSNP = 'http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=%s' +DBSNP = 'http://ensembl.org/Mus_musculus/Variation/Population?v=%s' +PROTEIN_ATLAS_URL = "http://www.proteinatlas.org/search/%s" +OPEN_TARGETS_URL = "https://genetics.opentargets.org/gene/%s" # Temporary storage (note that this TMPDIR can be set as an # environment variable - use utility.tools.TEMPDIR when you @@ -87,4 +90,3 @@ if not valid_path(JSON_GENODIR): PORTADDR = "http://50.16.251.170" INFOPAGEHREF = '/dbdoc/%s.html' CGIDIR = '/webqtl/' #XZ: The variable name 'CGIDIR' should be changed to 'PYTHONDIR' -SCRIPTFILE = 'main.py' |