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| author | BonfaceKilz | 2020-08-19 03:57:05 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-08-19 03:57:05 +0300 |
| commit | db41cd49b6d8ccd2c3318209118ffe098bc9293e (patch) | |
| tree | 01363468268316fe58335b958c992a9232d6b07e /wqflask/base/trait.py | |
| parent | 3aaa28ea762c496eeb84e09e45194e3fd2a51673 (diff) | |
| download | genenetwork2-db41cd49b6d8ccd2c3318209118ffe098bc9293e.tar.gz | |
Remove extra whitespace(or add it) from comma separated items
See: <https://docs.python.org/2/library/2to3.html#2to3fixer-urllib>
Diffstat (limited to 'wqflask/base/trait.py')
| -rw-r--r-- | wqflask/base/trait.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index 2b8f2e72..05b272c3 100644 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -193,7 +193,7 @@ class GeneralTrait(object): ''' if self.chr and self.mb: - self.location = 'Chr %s @ %s Mb' % (self.chr,self.mb) + self.location = 'Chr %s @ %s Mb' % (self.chr, self.mb) elif self.chr: self.location = 'Chr %s @ Unknown position' % (self.chr) else: @@ -440,7 +440,7 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False): #XZ, 05/08/2009: We also should use Geno.Id to find marker instead of just using Geno.Name # to avoid the problem of same marker name from different species. elif dataset.type == 'Geno': - display_fields_string = string.join(dataset.display_fields,',Geno.') + display_fields_string = string.join(dataset.display_fields, ',Geno.') display_fields_string = 'Geno.' + display_fields_string query = """ SELECT %s @@ -459,7 +459,7 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False): query = """SELECT %s FROM %s WHERE Name = %s""" logger.sql(query) trait_info = g.db.execute(query, - (string.join(dataset.display_fields,','), + (string.join(dataset.display_fields, ','), dataset.type, trait.name)).fetchone() if trait_info: |