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authorzsloan2020-04-24 16:06:36 -0500
committerzsloan2020-04-24 16:06:36 -0500
commitbe09d207ee4e2705e358102f8bdbcd1da7f70ca2 (patch)
treeb25f8fa1af57be93ef3698e76c0cfd0129346108 /wqflask/base/trait.py
parent2a119affad1830d5a693860279ca2aa2897d84ef (diff)
downloadgenenetwork2-be09d207ee4e2705e358102f8bdbcd1da7f70ca2.tar.gz
Replaced hard-coded instances of GN2 urls with ones pulled from settings file
Diffstat (limited to 'wqflask/base/trait.py')
-rw-r--r--wqflask/base/trait.py7
1 files changed, 4 insertions, 3 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py
index 5525472e..e454c593 100644
--- a/wqflask/base/trait.py
+++ b/wqflask/base/trait.py
@@ -14,6 +14,7 @@ from base.data_set import create_dataset
from db import webqtlDatabaseFunction
from utility import webqtlUtil
from utility import hmac
+from utility.tools import GN2_BASE_URL
from wqflask import app
@@ -135,9 +136,9 @@ class GeneralTrait(object):
alias = 'Not available'
if self.symbol:
- human_response = requests.get("http://gn2.genenetwork.org/gn3/gene/aliases/" + self.symbol.upper())
- mouse_response = requests.get("http://gn2.genenetwork.org/gn3/gene/aliases/" + self.symbol.capitalize())
- other_response = requests.get("http://gn2.genenetwork.org/gn3/gene/aliases/" + self.symbol.lower())
+ human_response = requests.get(GN2_BASE_URL + "gn3/gene/aliases/" + self.symbol.upper())
+ mouse_response = requests.get(GN2_BASE_URL + "gn3/gene/aliases/" + self.symbol.capitalize())
+ other_response = requests.get(GN2_BASE_URL + "gn3/gene/aliases/" + self.symbol.lower())
if human_response and mouse_response and other_response:
alias_list = json.loads(human_response.content) + json.loads(mouse_response.content) + json.loads(other_response.content)