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authorZachary Sloan2013-10-25 18:16:54 -0500
committerZachary Sloan2013-10-25 18:16:54 -0500
commit6fc0b92ad14bfbc8c752b7730f70c6b22294f667 (patch)
treeb62f6f4b667161742437ca433e62f0033132de83 /wqflask/base/trait.py
parent4eb2c2244b083d6522db02dff5ddb036af496392 (diff)
downloadgenenetwork2-6fc0b92ad14bfbc8c752b7730f70c6b22294f667.tar.gz
Began working on color coding bar chart by extra attributes
Diffstat (limited to 'wqflask/base/trait.py')
-rwxr-xr-xwqflask/base/trait.py6
1 files changed, 4 insertions, 2 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py
index 6a64eeaf..77e451a1 100755
--- a/wqflask/base/trait.py
+++ b/wqflask/base/trait.py
@@ -382,6 +382,7 @@ class GeneralTrait(object):
#trait_qtl = self.cursor.fetchone()
if trait_qtl:
self.locus, self.lrs, self.pvalue, self.mean = trait_qtl
+ print("self.locus:", self.locus)
if self.locus:
query = """
select Geno.Chr, Geno.Mb from Geno, Species
@@ -390,8 +391,9 @@ class GeneralTrait(object):
Geno.SpeciesId = Species.Id
""".format(self.dataset.group.species, self.locus)
result = g.db.execute(query).fetchone()
- self.locus_chr = result[0]
- self.locus_mb = result[1]
+ if result:
+ self.locus_chr = result[0]
+ self.locus_mb = result[1]
else:
self.locus = self.locus_chr = self.locus_mb = self.lrs = self.pvalue = self.mean = ""