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authorLei Yan2015-07-10 20:12:00 +0000
committerLei Yan2015-07-10 20:12:00 +0000
commitaa159a17785cc415e81346963aa76f05f5f9d4ad (patch)
treeae0502dac39d8cf20115b58817df4931a03b727c /wqflask/base/mrna_assay_tissue_data.py
parent239c5ff97a88bd9ae3c439ca244daca2696fe68b (diff)
parent840285e3533790760b763aaa43d3099f9b0a5d69 (diff)
downloadgenenetwork2-aa159a17785cc415e81346963aa76f05f5f9d4ad.tar.gz
Merge https://github.com/genenetwork/genenetwork2
Diffstat (limited to 'wqflask/base/mrna_assay_tissue_data.py')
-rwxr-xr-xwqflask/base/mrna_assay_tissue_data.py6
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/base/mrna_assay_tissue_data.py b/wqflask/base/mrna_assay_tissue_data.py
index 1a05fce7..b2c0448a 100755
--- a/wqflask/base/mrna_assay_tissue_data.py
+++ b/wqflask/base/mrna_assay_tissue_data.py
@@ -51,15 +51,15 @@ class MrnaAssayTissueData(object):
             
             query += ''' Symbol in {} group by Symbol)
                 as x inner join TissueProbeSetXRef as t on t.Symbol = x.Symbol
-                and t.Mean = x.maxmean;
+                and t.Mean = x.maxmean;http://docs.python.org/2/library/string.html?highlight=lower#string.lower
                     '''.format(in_clause)
 
         results = g.db.execute(query).fetchall()
         
         for result in results:
             symbol = result[0]
-            if symbol in gene_symbols:
-            #gene_symbols.append(symbol)
+            if symbol.lower() in [gene_symbol.lower() for gene_symbol in gene_symbols]:
+                #gene_symbols.append(symbol)
                 symbol = symbol.lower()
                 
                 self.data[symbol].gene_id = result.GeneId