diff options
author | zsloan | 2020-10-08 14:34:23 -0500 |
---|---|---|
committer | zsloan | 2020-10-08 14:34:23 -0500 |
commit | 46232706289575e1798442f3a763aaf1407ec6fa (patch) | |
tree | c4c383ce09efd240f279f5bc6564eebdcf583169 /wqflask/base/data_set.py | |
parent | 04a2cb3fd909598b4c51baa63229f8609aa90999 (diff) | |
parent | 4f47ebdac92a4255c9a12aa7235affc777114268 (diff) | |
download | genenetwork2-46232706289575e1798442f3a763aaf1407ec6fa.tar.gz |
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing
Diffstat (limited to 'wqflask/base/data_set.py')
-rw-r--r-- | wqflask/base/data_set.py | 34 |
1 files changed, 0 insertions, 34 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index afffe780..e0ef559c 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -1173,40 +1173,6 @@ class TempDataSet(DataSet): self.fullname = 'Temporary Storage' self.shortname = 'Temp' - @staticmethod - def handle_pca(desc): - if 'PCA' in desc: - # Todo: Modernize below lines - desc = desc[desc.rindex(':')+1:].strip() - else: - desc = desc[:desc.index('entered')].strip() - return desc - - def get_desc(self): - query = 'SELECT description FROM Temp WHERE Name=%s' % self.name - logger.sql(query) - g.db.execute(query) - desc = g.db.fetchone()[0] - desc = self.handle_pca(desc) - return desc - - def retrieve_sample_data(self, trait): - query = """ - SELECT - Strain.Name, TempData.value, TempData.SE, TempData.NStrain, TempData.Id - FROM - TempData, Temp, Strain - WHERE - TempData.StrainId = Strain.Id AND - TempData.Id = Temp.DataId AND - Temp.name = '%s' - Order BY - Strain.Name - """ % escape(trait.name) - - logger.sql(query) - results = g.db.execute(query).fetchall() - def geno_mrna_confidentiality(ob): dataset_table = ob.type + "Freeze" |