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author | zsloan | 2017-07-06 17:03:59 +0000 |
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committer | zsloan | 2017-07-06 17:03:59 +0000 |
commit | 97ee021da1250a63e508461b35188bc875e537e7 (patch) | |
tree | 2111574cac4f9408aa6223e10391d2a9a3f15244 /wqflask/base/data_set.py | |
parent | 1364fc973518aa13643c3d604a5ccc710bd76e0d (diff) | |
parent | d86f07f616d6892707dd26c87bf70db1a50f070a (diff) | |
download | genenetwork2-97ee021da1250a63e508461b35188bc875e537e7.tar.gz |
Merge branch 'testing' of https://github.com/genenetwork/genenetwork2
Diffstat (limited to 'wqflask/base/data_set.py')
-rw-r--r-- | wqflask/base/data_set.py | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 4959457a..dbdbb51c 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -169,7 +169,7 @@ def mescape(*items): class Markers(object): """Todo: Build in cacheing so it saves us reading the same file more than once""" def __init__(self, name): - json_data_fh = open(locate(name + '.json','genotype/json')) + json_data_fh = open(locate(name + ".json",'genotype/json')) try: markers = json.load(json_data_fh) except: @@ -334,7 +334,10 @@ class DatasetGroup(object): else: marker_class = Markers - self.markers = marker_class(self.name) + if self.genofile: + self.markers = marker_class(self.genofile[:-5]) + else: + self.markers = marker_class(self.name) def get_f1_parent_strains(self): try: |