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authorzsloan2020-09-30 13:32:54 -0500
committerzsloan2020-09-30 13:32:54 -0500
commit4bd5534658fe7ed2a9ffd50c137be81d7a7b190b (patch)
tree9fb537ff236fd0ccdd11a1bd5f931a67e815e952 /wqflask/base/data_set.py
parentd34258bed3ef13350499414100401df3bf08a105 (diff)
downloadgenenetwork2-4bd5534658fe7ed2a9ffd50c137be81d7a7b190b.tar.gz
Removed unused code from TempDataSet class
* wqflask/base/data_set.py - TempDataSet class contained some code referring to the SQL DB, but temp traits aren't stored in the SQL DB anymore
Diffstat (limited to 'wqflask/base/data_set.py')
-rw-r--r--wqflask/base/data_set.py34
1 files changed, 0 insertions, 34 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index afffe780..e0ef559c 100644
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -1173,40 +1173,6 @@ class TempDataSet(DataSet):
self.fullname = 'Temporary Storage'
self.shortname = 'Temp'
- @staticmethod
- def handle_pca(desc):
- if 'PCA' in desc:
- # Todo: Modernize below lines
- desc = desc[desc.rindex(':')+1:].strip()
- else:
- desc = desc[:desc.index('entered')].strip()
- return desc
-
- def get_desc(self):
- query = 'SELECT description FROM Temp WHERE Name=%s' % self.name
- logger.sql(query)
- g.db.execute(query)
- desc = g.db.fetchone()[0]
- desc = self.handle_pca(desc)
- return desc
-
- def retrieve_sample_data(self, trait):
- query = """
- SELECT
- Strain.Name, TempData.value, TempData.SE, TempData.NStrain, TempData.Id
- FROM
- TempData, Temp, Strain
- WHERE
- TempData.StrainId = Strain.Id AND
- TempData.Id = Temp.DataId AND
- Temp.name = '%s'
- Order BY
- Strain.Name
- """ % escape(trait.name)
-
- logger.sql(query)
- results = g.db.execute(query).fetchall()
-
def geno_mrna_confidentiality(ob):
dataset_table = ob.type + "Freeze"