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authorLei Yan2013-09-13 14:07:27 -0500
committerLei Yan2013-09-13 14:07:27 -0500
commitaf24c0d610d9a2189f86677e4f23deb372ee2bf7 (patch)
tree53480351b97727670637a37dbd4c78e52446ae88 /webtests/correlation_matrix_test.py
parent155e2997613c0750de30b734686f8977524956f9 (diff)
parentc5fc931621707865357ace4b637db7481e0be552 (diff)
downloadgenenetwork2-af24c0d610d9a2189f86677e4f23deb372ee2bf7.tar.gz
Merge https://github.com/zsloan/genenetwork
Resolved conflicts: wqflask/base/trait.py wqflask/wqflask/correlation/correlationFunction.py wqflask/wqflask/correlation/correlation_function.py wqflask/wqflask/correlation/correlation_functions.py wqflask/wqflask/correlation/show_corr_results.py
Diffstat (limited to 'webtests/correlation_matrix_test.py')
-rw-r--r--webtests/correlation_matrix_test.py72
1 files changed, 72 insertions, 0 deletions
diff --git a/webtests/correlation_matrix_test.py b/webtests/correlation_matrix_test.py
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+"""
+
+Test Correlation matrix
+
+>>> test.get("http://genenetwork.org/")
+title: GeneNetwork
+
+Choose the type
+>>> test.click_option('''//*[@id="tissue"]''', 'Hippocampus mRNA')
+
+Enter the Get Any
+>>> test.enter_text('''//*[@id="tfor"]''', 'grin2b')
+text: grin2b
+
+Search
+>>> test.click('//*[@id="btsearch"]')
+clicked: Search
+
+Add 1430675_at
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[2]/td/input''')
+clicked: HC_M2_0606_P::1430675_at
+
+Add 1442370_at
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[3]/td/input''')
+clicked: HC_M2_0606_P::1442370_at
+
+Add 1457003_at
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[4]/td/input''')
+clicked: HC_M2_0606_P::1457003_at
+
+Add 1422223_at
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[3]/td/div/table/tbody/tr[5]/td/input''')
+clicked: HC_M2_0606_P::1422223_at
+
+>>> sleep(5)
+
+Add to collection page
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/p/table/tbody/tr[1]/td/table/tbody/tr[1]/td[4]/a''')
+clicked: Notext
+
+>>> sleep(5)
+
+A new window is created, so we switch to it
+>>> test.switch_window()
+title: BXD Trait Collection
+
+Select all records
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr/td/table/tbody/tr/td/table/tbody/tr/td/a/img''')
+clicked: Notext
+
+Click Matrix
+>>> test.click('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/table/tbody/tr/td/table/tbody/tr[2]/td/table/tbody/tr/td[2]/a/img''')
+clicked: Notext
+
+Another new window
+>>> test.switch_window()
+title: Correlation Matrix
+
+Sleep a bunch because this can take a while
+>>> sleep(10)
+
+Ensure that the correlation between Trait3 (HC_M2_0606_P::1457003_at) and Trait4 (HC_M2_0606_P::1422223_at) is 0.608
+>>> test.get_text('''/html/body/table/tbody/tr[3]/td/table/tbody/tr/td/form/blockquote/table/tbody/tr[5]/td[5]/a/font''')
+text: 0.608\n71
+
+"""
+
+from __future__ import absolute_import, division, print_function
+
+from browser_run import *
+
+testmod()