Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'

1 files changed, 0 insertions, 70 deletions

diff --git a/web/webqtl/textUI/cmdSearchGene.py b/web/webqtl/textUI/cmdSearchGene.py
deleted file mode 100755
index c2c71815..00000000
--- a/web/webqtl/textUI/cmdSearchGene.py
+++ /dev/null
@@ -1,70 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-import string
-
-from cmdClass import cmdClass
-from search.TextSearchPage import TextSearchPage
-
-######################################### 
-#      Search Gene Symbol PAGE
-#########################################
-class cmdSearchGene(cmdClass):
-	def __init__(self,fd):
-		#example
-		cmdClass.__init__(self,fd)
-		self.page = None
-		self.text = ""
-		fd.geneName = fd.formdata.getvalue('gene')
-		fd.returnFmt = fd.formdata.getvalue('format', 'html')
-		if fd.geneName:
-			fd.geneName = string.strip(fd.geneName)
-		fd.refseq = fd.formdata.getvalue('refseq')
-		if fd.refseq:
-			fd.refseq = string.strip(fd.refseq)
-		fd.genbankid = fd.formdata.getvalue('genbankid')
-		if fd.genbankid:
-			fd.genbankid = string.strip(fd.genbankid)
-		fd.geneid = fd.formdata.getvalue('geneid')
-		if fd.geneid:
-			fd.geneid = string.strip(fd.geneid)
-		if 1:
-			if not (fd.geneName or fd.refseq or fd.genbankid or fd.geneid):
-				raise "ValueError"
-			fd.searchAlias = fd.formdata.getvalue('alias')
-			if fd.searchAlias != '1':
-				fd.searchAlias = None
-			self.page = TextSearchPage(fd)
-			if fd.returnFmt != 'text':
-				pass
-			else:
-				self.text = self.page.output
-				self.page = None
-		elif "ValueError":
-			self.text = "You need to submit a Gene name, a Refseq ID, or a GenBank ID"
-		else:
-			self.text = "Error occurs while searching the database"
-