Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'

1 files changed, 0 insertions, 71 deletions

diff --git a/web/webqtl/snpBrowser/snpBrowserUtils.py b/web/webqtl/snpBrowser/snpBrowserUtils.py
deleted file mode 100755
index 4da5c9cb..00000000
--- a/web/webqtl/snpBrowser/snpBrowserUtils.py
+++ /dev/null
@@ -1,71 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
- # The columns that are to be displayed are chosen at the line about 1000, with categories["info"]; this initializes the columns and assigns a 'variable_name' :and: "Display Name"
-columnNames = {
-	# The following are for ALL VARIANTS
-	        'variant':"Variant Type",
-	        'snpname':"SNP ID", # SnpAll.Id
-		'chromosome':"Chromosome",
-		'mb':"Mb",
-		'sourceName':"Source",
-		'sourceCreated':"Source Created",
-		'sourceAdded':"Source Added",
-		'sourceId':"Source", 
-		'gene':'Gene',
-	# The following are for SNP VARIANTS	
-		'source':'Source', 
-		'chr':'Chr', 
-		'snpId':"Submitter ID", #SnpAll.SnpName
-		'mbCelera':"Mb (CDS)",
-		'rs':"ID",
-		'function':"Function",
-		'type':"Type",
-		'majorCount':"Major Count",
-		'minorCount':"Minor Count",
-		'missingCount':"Missing Count",
-		'class':"Class",
-		'flanking5':"Flanking 5'",
-		'flanking3':"Flanking 3'",
-		'blatScore':"BLAT Score",
-		'majorAllele':"Major Allele",
-		'minorAllele':"Minor Allele",
-		'shortAlleles':'Reference',
-		"Proximal_Gap_bp":"Gap",
-		'domain':'Domain',
-		'ncbi':'NCBI Annotation',
-		'conservation':'ConScore',
-       # The following are for INDEL VARIANTS
-		'indelId':"ID", # Indel.Id Indel
-		'indelName':"ID", # Indel.Name
-		'indelType':"Type", # Indel.Type
-		'indelChr':"InDel Chr", # Indel.Chromosome
-		'indelMb_s':"Mb Start", # Indel.Mb_start
-		'indelMb_e':"Mb End", # IndelAll.Mb_end
-		'indelStrand':"Strand", # IndelAll.Strand
-		'indelSize':"Size", # IndelAll.Size
-		'indelSeq':"Sequence", # IndelAll.Sequence
-}
\ No newline at end of file