Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'

1 files changed, 0 insertions, 141 deletions

diff --git a/web/webqtl/showTrait/exportPage.py b/web/webqtl/showTrait/exportPage.py
deleted file mode 100755
index ff3f12a1..00000000
--- a/web/webqtl/showTrait/exportPage.py
+++ /dev/null
@@ -1,141 +0,0 @@
-import string
-import os
-import re
-import cPickle
-import pyXLWriter as xl
-
-from base import webqtlConfig
-from utility import webqtlUtil
-from base.templatePage import templatePage
-
-class ExportPage(templatePage):
-
-	def __init__(self, fd):
-
-		templatePage.__init__(self, fd)
-
-		filename = webqtlUtil.genRandStr("Export_")
-		workbook = xl.Writer('%s.xls' % (webqtlConfig.TMPDIR+filename))
-		style_formats = [] #Array with Excel style formats - Zach 9/2/2011
-		heading = workbook.add_format(align = 'center', bold = 1, border = 1, size=13, fg_color = 0x1E, color="white") #Style for the header cells
-		right  = workbook.add_format(align = 'right') #Style to align cell contents to the right
-		style_formats.append(heading)
-		style_formats.append(right)
-		worksheet = workbook.add_worksheet()
-
-		primaryStrainNames = fd.formdata.getvalue('strainNames', '').split(',')
-		primaryVals = fd.formdata.getvalue('strainVals', '').split(',')
-		primaryVars = fd.formdata.getvalue('strainVars', '').split(',')
-		otherStrainNames = fd.formdata.getvalue('otherStrainNames', '').split(',')
-		otherVals = fd.formdata.getvalue('otherStrainVals', '').split(',')
-		otherVars = fd.formdata.getvalue('otherStrainVars', '').split(',')
-		attributeData = fd.formdata.getvalue('extra_attributes', '')
-		otherAttributeData = fd.formdata.getvalue('other_extra_attributes', '')
-
-		#ZS: This section is to parse the attribute formdata string
-		attributeTypes = attributeData.split('/')
-		otherAttributeTypes = otherAttributeData.split('/')
-		
-		attributeNames = []
-		attributeVals = []
-		for i in range(len(attributeTypes)):
-			if i < len(attributeTypes) - 1:
-				attributeNames.append(attributeTypes[i].split(':')[0])
-				attributeVals.append(attributeTypes[i].split(':')[1].split(','))
-			else:
-				break
-
-		otherAttributeNames = []
-		otherAttributeVals = []
-		for i in range(len(otherAttributeTypes)):
-			if i < len(otherAttributeTypes) - 1:
-				otherAttributeNames.append(otherAttributeTypes[i].split(':')[0])
-				otherAttributeVals.append(otherAttributeTypes[i].split(':')[1].split(','))
-			else:
-				break
-
-		varsExist = 0 #ZS: Even if there are no variances "primaryVars" would still be populated with empty values, so we need to check if there really are any
-		for i in range(len(primaryVars)):
-			if primaryVars[i] != '':
-				varsExist = 1
-				break
-
-		otherStrainsExist = 0 #ZS: Same as above; checking to see if there's a set of "other" (non-primary) strains
-		for i in range(len(otherStrainNames)):
-			if otherStrainNames[i] != '':
-				otherStrainsExist = 1
-				break
-
-		if varsExist == 1:
-			column_headers = ["Sample", "Value", " SE "] #ZS: Names of the header for each column in the excel worksheet
-		else:
-			column_headers = ["Sample", "Value"]
-
-
-		for attr_name in attributeNames:
-			column_headers.append(attr_name)
-
-		start_line = 0 #Gets last line of "primary" strain values to define a start-point for "other" strain values
-		for ncol, item in enumerate(column_headers):
-			worksheet.write([start_line, ncol], item, style_formats[0])
-			worksheet.set_column([ncol, ncol], 2*len(item))
-
-		start_line += 1
-		last_line = start_line
-
-		for i in range(len(primaryStrainNames)):
-			ncol = 0
-			if varsExist == 1:
-				for ncol, item in enumerate([primaryStrainNames[i], primaryVals[i], primaryVars[i]]):
-					worksheet.write([start_line + i, ncol], item, style_formats[1])
-					ncol += 1
-			else:
-				for ncol, item in enumerate([primaryStrainNames[i], primaryVals[i]]):
-					worksheet.write([start_line + i, ncol], item, style_formats[1])
-					ncol += 1
-
-			for attribute_type in attributeVals:
-				worksheet.write([start_line + i, ncol], attribute_type[i], style_formats[1])
-				ncol += 1
-
-			last_line += 1
-
-		if otherStrainsExist == 1:
-				start_line = last_line + 2
-
-				for ncol, item in enumerate(column_headers):
-					worksheet.write([start_line, ncol], item, style_formats[0])
-					worksheet.set_column([ncol, ncol], 2*len(item))
-				start_line += 1
-
-				for i in range(len(otherStrainNames)):
-					ncol = 0
-					if varsExist == 1:
-						for ncol, item in enumerate([otherStrainNames[i], otherVals[i], otherVars[i]]):
-							worksheet.write([start_line + i, ncol], item, style_formats[1])
-							ncol += 1
-					else:
-						for ncol, item in enumerate([otherStrainNames[i], otherVals[i]]):
-							worksheet.write([start_line + i, ncol], item, style_formats[1])
-
-					for attribute_type in otherAttributeVals:
-						worksheet.write([start_line + i, ncol], attribute_type[i], style_formats[1])
-						ncol += 1
-
-		workbook.close()
-
-		full_filename = os.path.join(webqtlConfig.TMPDIR, '%s.xls' % filename)
-		fp = open(full_filename, 'rb')
-		text = fp.read()
-		fp.close()
-		
-		self.content_type = 'application/xls'
-		self.content_disposition = 'attachment; filename=%s' % ('%s.xls' % filename)
-		self.attachment = text
-		
-
-		
-
-
-
-