Add all the source codes into the github.

3 files changed, 115 insertions, 0 deletions

diff --git a/web/webqtl/pubmedsearch/PubmedSearch.py b/web/webqtl/pubmedsearch/PubmedSearch.py
new file mode 100755
index 00000000..8e7b0725
--- /dev/null
+++ b/web/webqtl/pubmedsearch/PubmedSearch.py
@@ -0,0 +1,58 @@
+# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
+#
+# This program is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Affero General Public License
+# as published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU Affero General Public License for more details.
+#
+# This program is available from Source Forge: at GeneNetwork Project
+# (sourceforge.net/projects/genenetwork/).
+#
+# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
+# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
+#
+#
+#
+# This module is used by GeneNetwork project (www.genenetwork.org)
+#
+# Created by GeneNetwork Core Team 2010/08/10
+#
+# Last updated by GeneNetwork Core Team 2010/10/20
+
+#geneWikiPage.py
+#
+#This one's pretty self-evident from the title. If you use the GeneWiki module, this is what's behind it. -KA
+
+# Xiaodong changed the dependancy structure
+
+from htmlgen import HTMLgen2 as HT
+import os
+import string
+
+from base.templatePage import templatePage
+from base import webqtlConfig
+from utility import webqtlUtil
+
+#########################################
+#########################################
+
+class PubmedSearch(templatePage):
+
+	def __init__(self, fd):
+		templatePage.__init__(self, fd)
+		self.content_type = 'text/html'
+		Heading = HT.Paragraph("pubmed search", Class="title")
+		Intro = HT.Blockquote("This is a description.")	
+		form = HT.Form(cgi=os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), name='pubmedsearch', submit=HT.Input(type='hidden'))
+		form.append(HT.Input(type="text", size = 45, maxlength=100, name="symbol"))	
+		form.append(HT.Input(type="hidden", name="FormID", value="pubmedsearchre"))
+		form.append(HT.Input(type="submit", name="submit", value="submit", Class="button"))
+		TD_LR = HT.TD(height=200,width="100%",bgColor='#eeeeee',valign="top")
+		TD_LR.append(Heading, Intro, HT.Center(form))
+		self.dict['body'] = str(TD_LR)
+		self.dict['title'] = "Pubmed Search"
\ No newline at end of file
diff --git a/web/webqtl/pubmedsearch/PubmedSearchRe.py b/web/webqtl/pubmedsearch/PubmedSearchRe.py
new file mode 100755
index 00000000..fcbfd941
--- /dev/null
+++ b/web/webqtl/pubmedsearch/PubmedSearchRe.py
@@ -0,0 +1,57 @@
+# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
+#
+# This program is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Affero General Public License
+# as published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU Affero General Public License for more details.
+#
+# This program is available from Source Forge: at GeneNetwork Project
+# (sourceforge.net/projects/genenetwork/).
+#
+# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
+# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
+#
+#
+#
+# This module is used by GeneNetwork project (www.genenetwork.org)
+#
+# Created by GeneNetwork Core Team 2010/08/10
+#
+# Last updated by GeneNetwork Core Team 2010/10/20
+
+#geneWikiPage.py
+#
+#This one's pretty self-evident from the title. If you use the GeneWiki module, this is what's behind it. -KA
+
+# Xiaodong changed the dependancy structure
+
+from htmlgen import HTMLgen2 as HT
+import os
+import string
+
+from base.templatePage import templatePage
+from base import webqtlConfig
+from utility import webqtlUtil
+
+#########################################
+#########################################
+
+class PubmedSearchRe(templatePage):
+
+	def __init__(self, fd):
+		templatePage.__init__(self, fd)
+		self.content_type = 'text/html'
+		Heading = HT.Paragraph("pubmed search", Class="title")
+		Intro = HT.Blockquote("This is a description.")	
+		
+		table = HT.TableLite(border=0, cellpadding=0, cellspacing=0)
+		
+		TD_LR = HT.TD(height=200,width="100%",bgColor='#eeeeee',valign="top")
+		TD_LR.append(Heading, Intro, HT.Center(form))
+		self.dict['body'] = str(TD_LR)
+		self.dict['title'] = "Pubmed Search"
\ No newline at end of file
diff --git a/web/webqtl/pubmedsearch/__init__.py b/web/webqtl/pubmedsearch/__init__.py
new file mode 100755
index 00000000..e69de29b
--- /dev/null
+++ b/web/webqtl/pubmedsearch/__init__.py