Add all the source codes into the github.

1 files changed, 137 insertions, 0 deletions

diff --git a/web/webqtl/misc/uploadFilePage.py b/web/webqtl/misc/uploadFilePage.py
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+++ b/web/webqtl/misc/uploadFilePage.py
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+# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
+#
+# This program is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Affero General Public License
+# as published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU Affero General Public License for more details.
+#
+# This program is available from Source Forge: at GeneNetwork Project
+# (sourceforge.net/projects/genenetwork/).
+#
+# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
+# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
+#
+#
+#
+# This module is used by GeneNetwork project (www.genenetwork.org)
+#
+# Created by GeneNetwork Core Team 2010/08/10
+#
+# Last updated by GeneNetwork Core Team 2010/10/20
+
+import os
+import string
+
+from htmlgen import HTMLgen2 as HT
+
+from base.templatePage import templatePage
+from base import webqtlConfig
+from utility import webqtlUtil
+
+#########################################
+#      Upload File Page 
+#########################################
+
+class uploadFilePage(templatePage):
+
+	uploadPath = webqtlConfig.UPLOADPATH
+
+	def __init__(self, fd, formdata, cookies):
+
+		templatePage.__init__(self, fd)
+
+		if not self.openMysql():
+			return
+
+                if webqtlConfig.USERDICT[self.privilege] >= webqtlConfig.USERDICT['user']:
+                        pass
+                else:
+                        heading = "Upload File"
+                        detail = ["You don't have the permission to upload file to the server."]
+                        self.error(heading=heading,detail=detail)
+                        return
+		
+		self.cursor.close()
+
+		file1 = self.save_uploaded_file (formdata, 'imgName1')
+		file2 = self.save_uploaded_file (formdata, 'imgName2')
+		file3 = self.save_uploaded_file (formdata, 'imgName3')
+		file4 = self.save_uploaded_file (formdata, 'imgName4')
+		file5 = self.save_uploaded_file (formdata, 'imgName5')
+		
+		i = 0
+		uploaded = []
+
+		for filename in (file1, file2, file3, file4, file5):
+			if filename: 
+				i += 1
+				uploaded.append(filename)
+				
+		if i == 0:
+			heading = "Upload File"
+			detail = ["No file was selected, no file uploaded."]
+			self.error(heading=heading,detail=detail)
+			return
+		else:
+			TD_LR = HT.TD(height=200,width="100%",bgColor='#eeeeee')
+
+			imgTbl = HT.TableLite(border=0, width = "90%",cellspacing=2, cellpadding=2, align="Center")
+			imgTbl.append(HT.TR(HT.TD("Thumbnail", width="%30", align='center',Class="colorBlue"), 
+					HT.TD("URL", width="%60",Class="colorBlue", align='center')))
+			for item in uploaded:
+				img = HT.Image("/images/upload/" + item, border = 0, width=80)
+
+				#url = "%s/images/upload/" % webqtlConfig.PORTADDR + item
+				#url = HT.Href(text=url, url = url, Class='normalsize', target="_blank")
+				url2 = "/images/upload/" + item
+				url2 = HT.Href(text=url2, url = url2, Class='normalsize', target="_blank")
+				imgTbl.append(HT.TR(HT.TD(img, width="%30", align='center',Class="colorWhite"), 
+					#HT.TD(url, HT.BR(), 'OR', HT.BR(), url2,  width="%60",Class="colorWhite", align='center')))
+					HT.TD(url2,  width="%60",Class="colorWhite", align='center')))
+
+			intro = HT.Paragraph('A total of %d files are uploaded' % i)
+			TD_LR.append( HT.Center(intro) )
+
+			TD_LR.append( imgTbl )
+		
+			self.dict['body'] = str(TD_LR)	
+		
+	def save_uploaded_file(self, form, form_field, upload_dir=""):
+		if not upload_dir:
+			upload_dir = self.uploadPath
+		if not form.has_key(form_field):
+			return None
+		fileitem = form[form_field]
+		
+		if not fileitem.filename or not fileitem.file:
+			return None
+		
+		seqs = [""] + range(200)
+		try:
+			newfileName =  string.split(fileitem.filename, ".")
+			for seq in seqs:
+				newfileName2 = newfileName[:]
+				if seq != "":
+					newfileName2[-2] = "%s-%s" % (newfileName2[-2], seq)
+				fileExist = glob.glob(os.path.join(upload_dir, string.join(newfileName2, ".")))
+				if not fileExist:
+					break
+		except:
+			pass
+		
+		newfileName = string.join(newfileName2, ".")
+		#print [newfileName, os.path.join(upload_dir, newfileName)]
+		#return
+		
+		fout = file (os.path.join(upload_dir, newfileName), 'wb')
+		while 1:
+			chunk = fileitem.file.read(100000)
+			if not chunk: break
+			fout.write (chunk)
+		fout.close()
+		return newfileName